LifeWatch ERIC Metadata Catalogue
Species_occ_biotope.csv
Output file of the "Biotope GBIF Extractor" service (step 1a) of the Biotope vulnerability Workflow within the Internal Joint Initiative. It represents also the output file of the "Occurrences Dataset Uploader" service (step 1b) when the input comes from the user. It is a CSV file with species occurrences in one country. It contains at least 5 columns:
- decimalLatitude (numeric) : the latitude of the observed specimen expressed in decimal degree in WGS 84 coordinate system (EPSG:4326)
- decimalLongitude (numeric) : the longitude of the observed specimen expressed in decimal degree in WGS 84 coordinate system (EPSG:4326)
- acceptedScientificName (text) : the name of the species
- ClassKey (numeric): the GBIF taxonomic class key
- TaxonKey (numeric): the GBIF taxonomic class key
- year (numeric) : the year of the observation
- coordinateUncertaintyInMeters (numeric) : the CE 95 uncertainty on the location of the observation, expressed in meter.
Default
Identification
- Alternate Identifier
- 0274dcc3-ab90-4bb8-a4f9-ccf1469dcfc8
- Publication Date
- 2021-04-23
- Title
- Species_occ_biotope.csv
- Abstract
-
Output file of the "Biotope GBIF Extractor" service (step 1a) of the Biotope vulnerability Workflow within the Internal Joint Initiative. It represents also the output file of the "Occurrences Dataset Uploader" service (step 1b) when the input comes from the user. It is a CSV file with species occurrences in one country. It contains at least 5 columns:
- decimalLatitude (numeric) : the latitude of the observed specimen expressed in decimal degree in WGS 84 coordinate system (EPSG:4326)
- decimalLongitude (numeric) : the longitude of the observed specimen expressed in decimal degree in WGS 84 coordinate system (EPSG:4326)
- acceptedScientificName (text) : the name of the species
- ClassKey (numeric): the GBIF taxonomic class key
- TaxonKey (numeric): the GBIF taxonomic class key
- year (numeric) : the year of the observation
- coordinateUncertaintyInMeters (numeric) : the CE 95 uncertainty on the location of the observation, expressed in meter.
- Dataset Creator
- Dataset Creator
- Metadata Provider
- Metadata Provider
- Dataset Contact
- Dataset Contact
- Keywords ( )
-
- species distribution
- occurrences
- Biotope
- IJI
Taxonomic Coverage
License Information
- Intellectual Rights
Distribution
Online
- A brief description of the the content of online URL.
- Dataset
Data Tables
Data Tables
• Data Table
- Name
- Species_occ_biotope
Physicaldocument
Data Format
Externally Defined Format
- Format Name
- csv
Attribute List
Attribute
- Name
- gbifID
- Label
- Definition
- Standard Unit
- Annotation
-
Attribute
- Name
- datasetKey
- Label
- Definition
- The occurrence dataset key (a uuid).
- Standard Unit
- Annotation
-
Attribute
- Name
- occurrenceid
- Label
- Definition
- An identifier for the Occurrence (as opposed to a particular digital record of the occurrence). In the absence of a persistent global unique identifier, construct one from a combination of identifiers in the record that will most closely make the occurrenceID globally unique.
- Standard Unit
- Annotation
-
http://rs.tdwg.org/dwc/terms/occurrenceID
Attribute
- Name
- kingdom
- Label
- Definition
- The full scientific name of the kingdom in which the taxon is classified.
- Standard Unit
- Annotation
-
http://rs.tdwg.org/dwc/terms/kingdom
Attribute
- Name
- phylum
- Label
- Definition
- The full scientific name of the phylum or division in which the taxon is classified.
- Standard Unit
- Annotation
-
http://rs.tdwg.org/dwc/terms/phylum
Attribute
- Name
- class
- Label
- Definition
- The full scientific name of the class in which the taxon is classified.
- Standard Unit
- Annotation
-
http://rs.tdwg.org/dwc/terms/class
Attribute
- Name
- order
- Label
- Definition
- The full scientific name of the order in which the taxon is classified.
- Standard Unit
- Annotation
-
http://rs.tdwg.org/dwc/terms/order
Attribute
- Name
- family
- Label
- Definition
- The full scientific name of the family in which the taxon is classified.
- Standard Unit
- Annotation
-
http://rs.tdwg.org/dwc/terms/family
Attribute
- Name
- genus
- Label
- Definition
- The full scientific name of the genus in which the taxon is classified.
- Standard Unit
- Annotation
-
http://rs.tdwg.org/dwc/terms/genus
- Annotation
-
http://rs.tdwg.org/dwc/terms/genus
Attribute
- Name
- acceptedNameUsage (species)
- Label
- Definition
- The full name, with authorship and date information if known, of the currently valid (zoological) or accepted (botanical) taxon.
- Standard Unit
- Annotation
-
http://rs.tdwg.org/dwc/terms/acceptedNameUsage
Attribute
- Name
- infraspecificepithet
- Label
- Definition
- The name of the lowest or terminal infraspecific epithet of the scientificName, excluding any rank designation.
- Standard Unit
- Annotation
-
http://rs.tdwg.org/dwc/terms/infraspecificEpithet
Attribute
- Name
- taxonrank
- Label
- Definition
- The taxonomic rank of the most specific name in the scientificName.
- Standard Unit
- Annotation
-
http://rs.tdwg.org/dwc/terms/taxonRank
Attribute
- Name
- scientificname
- Label
- Definition
- The full scientific name, with authorship and date information if known. When forming part of an Identification, this should be the name in lowest level taxonomic rank that can be determined. This term should not contain identification qualifications, which should instead be supplied in the IdentificationQualifier term.
- Standard Unit
- Annotation
-
http://rs.tdwg.org/dwc/terms/scientificName
Attribute
- Name
- verbatimscientificname
- Label
- Definition
- The scientific name provided to GBIF by the data publisher, before interpretation and processing by GBIF.
- Standard Unit
- Annotation
-
Attribute
- Name
- countrycode
- Label
- Definition
- The standard code for the country in which the Location occurs.
- Standard Unit
- Annotation
-
http://rs.tdwg.org/dwc/terms/countryCode
Attribute
- Name
- locality
- Label
- Definition
- The specific description of the place. Less specific geographic information can be provided in other geographic terms (higherGeography, continent, country, stateProvince, county, municipality, waterBody, island, islandGroup). This term may contain information modified from the original to correct perceived errors or standardize the description.
- Standard Unit
- Annotation
-
http://rs.tdwg.org/dwc/terms/locality
Attribute
- Name
- decimallatitude
- Label
- Definition
- The geographic latitude (in decimal degrees, using the spatial reference system given in geodeticDatum) of the geographic center of a Location. Positive values are north of the Equator, negative values are south of it. Legal values lie between -90 and 90, inclusive.
- Standard Unit
- Annotation
-
http://rs.tdwg.org/dwc/terms/decimalLatitude
Attribute
- Name
- decimallongitude
- Label
- Definition
- The geographic longitude (in decimal degrees, using the spatial reference system given in geodeticDatum) of the geographic center of a Location. Positive values are east of the Greenwich Meridian, negative values are west of it. Legal values lie between -180 and 180, inclusive.
- Standard Unit
- Annotation
-
http://rs.tdwg.org/dwc/terms/decimalLongitude
Attribute
- Name
- coordinateuncertaintyinmeters
- Label
- Definition
- The horizontal distance (in meters) from the given decimalLatitude and decimalLongitude describing the smallest circle containing the whole of the Location. Supports range queries.
- Standard Unit
Attribute
- Name
- eventdate
- Label
- Definition
- The date-time or interval during which an Event occurred. For occurrences, this is the date-time when the event was recorded. Not suitable for a time in a geological context.
- Standard Unit
- YYYY-MM-DD THH-MM-SS
- Annotation
-
http://rs.tdwg.org/dwc/terms/eventDate
Attribute
- Name
- year
- Label
- Definition
- The four-digit year in which the Event occurred, according to the Common Era Calendar.
- Standard Unit
- YYYY
- Annotation
-
http://rs.tdwg.org/dwc/terms/year
Attribute
- Name
- taxonKey
- Label
- Definition
- A taxon key from the GBIF backbone. All included and synonym taxa are included in the search, so a search for aves with taxonKey=212 (i.e. /occurrence/search?taxonKey=212) will match all birds, no matter which species.
- Standard Unit
Attribute
- Name
- classkey
- Label
- Definition
- Class classification key
- Standard Unit
- Annotation
-
