ENMeval R package - Automated Tuning and Evaluations of Ecological Niche Models
The package runs ecological niche models over all combinations of user-defined settings (i.e., tuning), performs cross validation to evaluate models, and returns data tables to aid in selection of optimal model settings that balance goodness-of-fit and model complexity. Moreover, it provides functions to partition data spatially (or not) for cross validation, to plot multiple visualizations of results, to run null models to estimate significance and effect sizes of performance metrics, and to calculate niche overlap between model predictions, among others. The package was originally built for Maxent models, but the current version allows possible extensions for any modeling algorithm.
Default
Identification
- Date ( Publication )
- 2023-01-07
- Status
- Completed
- Version
- 2.0.4
- Keywords
- Ecological Niche Models
- Keywords
- ENMs
- Keywords
- model evaluation
- Keywords
- cross validation
- Keywords
- R
- Access constraints
- License
- Use limitation
- https://cran.r-project.org/web/licenses/GPL-3
- OnLine resource
- CRAN link ( WWW:LINK-1.0-http--link )
- Required Services
- R (≥ 3.5.0)
- Topic Category
- Species distribution
- Service Category
- model evaluation
- Service Category
- model validation
- Service Language
- eng
- Service TRL
- TRL 9 – Actual system proven in operational environment
- Service User Manual
- https://cran.r-project.org/web/packages/ENMeval/ENMeval.pdf