CESAM - University of Aveiro
Type of resources
Keywords
Contact for the resource
Years
status
Groups
-
Output file of the "Occurrences Syntax Normalizer" service (step 3) of the Biotope vulnerability Workflow within the Internal Joint Initiative. It represents also the input file of the "Occurrence Datacube Builder" service (step 4) if incidence is considered, or the input file of the "CIMPAL Calculator" service (step 6) if impact is considered. It is a TXT file with TSV data that includes the alien taxa in the area of interest, from GRIIS or uploaded by the user.
-
Output file of the "CIMPAL Calculator" service (step 6) of the Biotope vulnerability Workflow within the Internal Joint Initiative. It represents also the input of the "Zonal Statistics Producer" service (step 7). It represents the vulnerability of biotopes to the impacts of a given alien species according to the magnitude of impact reported.
-
Input file of the "CIMPAL Calculator" service (step 6) of the Biotope vulnerability Workflow within the Internal Joint Initiative. It represents the habitat spatial layers, habitat names must match the biotope categories used in input file "Biotope_NIS_impact_matrix.csv". This information can be provided as a set of files with a single biotope per file (in which case the file must be named single_[name_of_biotope].shp )], as a file with multiple biotopes (in which case the name of each biotope is stored in a field called "Habitat"), or both.
-
Output file of the "Occurrences DataCube Analyst" service (step 5) of the Biotope vulnerability Workflow within the Internal Joint Initiative. It represents also the input of the "Zonal Statistics Producer" service (step 7). It is the vulnerability map that represents the cumulative alien taxa observation for all the years.
-
Output file of the "CIMPAL Calculator" service (step 6) of the Biotope vulnerability Workflow within the Internal Joint Initiative. It represents also the input of the "Zonal Statistics Producer" service (step 7). It is the vulnerability of biotopes to invasive alien species according to the cumulative magnitude of impact reported.
-
Output file of the "Zonal Statistics Producer" service (step 7) of the Biotope vulnerability Workflow within the Internal Joint Initiative. It includes the statistics per zone of any given quantitative variable. The separator is a semi-colon and the first line contains the names of the fields. Each row provides the code of the zone and the spatial statistics of the quantitative variable.
-
Output file of the "Occurrences DataCube Analyst" service (step 5) of the Biotope vulnerability Workflow within the Internal Joint Initiative. It represents also the input of the "Zonal Statistics Producer" service (step 7). It is the incidence map that represents the ratio of the occurrences of alien species by the total number of observed species.
-
Output file of the "CIMPAL Calculator" service (step 6) of the Biotope vulnerability Workflow within the Internal Joint Initiative. It represents also an optional input of the "Zonal Statistics Producer" service (step 7). It is a TXT file that contains information on the coordinates system used.
-
Output file of the "Occurrences Syntax Normalizer" service (step 3) of the Biotope vulnerability Workflow within the Internal Joint Initiative. It represents also the input file of the "Occurrence Datacube Builder" service (step 4) if incidence is considered, or the input file of the "CIMPAL Calculator" service (step 6) if impact is considered. It is a TXT file that contains TSV data with species occurrences in one country. It contains at least 5 columns: - CoordN (numeric) : the latitude of the observed specimen expressed in decimal degree in WGS 84 coordinate system (EPSG:4326) - CoordE (numeric) : the longitude of the observed specimen expressed in decimal degree in WGS 84 coordinate system (EPSG:4326) - Name (text) : the name of the species - ClassKey (numeric): the GBIF taxonomic class key - TaxonKey (numeric): the GBIF taxonomic class key - Year (numeric) : the year of the observation - CoordPrecision (numeric) : the CE 95 uncertainty on the location of the observation, expressed in meter.
-
Input file of the "CIMPAL Calculator" service (step 6) of the Biotope vulnerability Workflow within the Internal Joint Initiative. It is an optional file that lists the possible pathways or vectors of introduction (the categories are defined by the user) for each non-indigenous species. More than one pathway is allowed per species. The structure of the file is as follows: - Species name (text) - Pathway of introduction (text)