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Micro-CT Morphological Data of Glycera tridactyla Schmarda, 1861 and Phascolosoma (Phascolosoma) stephensoni (Stephen, 1942) species

This dataset comprises morphological data for two annelid species, the polychaete Glycera tridactyla Schmarda, 1861, and the sipunculan Phascolosoma (Phascolosoma) stephensoni (Stephen, 1942), obtained using micro-computed tomography (micro-CT). Several parameters related to the eversion mechanism of the pharynx in Polychaeta and the introvert in Sipuncula were estimated through two- and three-dimensional analyses of micro-CT datasets from specimens in different body configurations.

Default

IdentificationAbout this resource

Alternate Identifier

10.25607/mqd09f

Alternate Identifier

22fa3c39-2ff0-4f78-826f-bf526df17354

Alternate Identifier
https://ipt.medobis.eu/resource?r=micro-ct_morphological_data_glycera-tridactyla-phascolosoma-stephensoni
Publication Date
2026-02-13
Title

Micro-CT Morphological Data of Glycera tridactyla Schmarda, 1861 and Phascolosoma (Phascolosoma) stephensoni (Stephen, 1942) species

Abstract

This dataset comprises morphological data for two annelid species, the polychaete Glycera tridactyla Schmarda, 1861, and the sipunculan Phascolosoma (Phascolosoma) stephensoni (Stephen, 1942), obtained using micro-computed tomography (micro-CT). Several parameters related to the eversion mechanism of the pharynx in Polychaeta and the introvert in Sipuncula were estimated through two- and three-dimensional analyses of micro-CT datasets from specimens in different body configurations.

Dataset Language

ENGLISH

 
Dataset Creator
  Institute of Marine Biology, Biotechnology and Aquaculture - Hellenic Centre for Marine Research (IMBBC-HCMR) - Kleoniki Keklikoglou (Research fellow)

Gournes Pediados

,

Heraklion

,

Crete

,

71500

,

GREECE

https://imbbc.hcmr.gr/user/keklikoglou/
Dataset Creator
  Institute of Marine Biology, Biotechnology and Aquaculture - Hellenic Centre for Marine Research (IMBBC-HCMR) - Emmanouela Vernadou (Research Technician (MSc))

Gournes Pediados

,

Heraklion

,

Crete

,

71500

,

GREECE

Dataset Creator
  Institute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research - Dimitra Mavraki (Data manager)

Thalassocosmos, Former American Base

,

Heraklion

,

Crete

,

71003

,

GREECE

Dataset Creator
  Institute of Marine Biology, Biotechnology and Aquaculture - Hellenic Centre for Marine Research (IMBBC-HCMR) - Eva Chatzinikolaou (Research fellow)

Gournes Pediados

,

Heraklion

,

Crete

,

71500

,

GREECE

Dataset Creator
  National Interuniversity Consortium for Marine Sciences (CoNISMa) - Joachim Langeneck (Research fellow)

University of Salento, Campus Ecotekne, strada provinciale Lecce-Monteroni

,

Lecce

,

00196

,

ITALY

Dataset Creator
  National Interuniversity Consortium for Marine Sciences (CoNISMa) - Luigi Musco (Research fellow)

University of Salento, Campus Ecotekne, strada provinciale Lecce-Monteroni

,

Lecce

,

00196

,

ITALY

Metadata Provider
  Institute of Marine Biology, Biotechnology and Aquaculture - Hellenic Centre for Marine Research (IMBBC-HCMR) - Kleoniki Keklikoglou (Research fellow)

Gournes Pediados

,

Heraklion

,

Crete

,

71500

,

GREECE

https://imbbc.hcmr.gr/user/keklikoglou/
Associated Party

CUSTODIAN_STEWARD

  Institute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research - Dimitra Mavraki (Data manager)

Thalassocosmos, Former American Base

,

Heraklion

,

Crete

,

71003

,

GREECE

Associated Party

CUSTODIAN_STEWARD

  Institute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research - Ioannis Rallis (Data manager, Marine Biologist)

Heraklion

,

GREECE

Dataset Contact
  Institute of Marine Biology, Biotechnology and Aquaculture - Hellenic Centre for Marine Research (IMBBC-HCMR) - Kleoniki Keklikoglou (Research fellow)

Gournes Pediados

,

Heraklion

,

Crete

,

71500

,

GREECE

https://imbbc.hcmr.gr/user/keklikoglou/
Keywords (GBIF Dataset Type Vocabulary: http://rs.gbif.org/vocabulary/gbif/dataset_type_2015-07-10.xml)
  • Samplingevent

Keywords (GBIF Dataset Subtype Vocabulary: http://rs.gbif.org/vocabulary/gbif/dataset_subtype.xml)
  • Specimen

Keywords (none)
  • Polychaeta

Keywords (none)
  • Sipuncula

Keywords (none)
  • 3D analysis

Keywords (none)
  • eversion mechanism

Keywords (none)
  • introvert

Keywords (none)
  • pharynx

Geographic Coverage

Geographic Description

Sampling took place in two different areas located in the Gulf of Taranto, Ionian Sea

Bounding Box

West Bounding Coordinate

17.37

East Bounding Coordinate

17.91

North Bounding Coordinate

40.35

South Bounding Coordinate

40.24

Temporal Coverage

Single Date Time

2022-10-12

Temporal Coverage

Single Date Time

2023-06-14

Temporal Coverage

Single Date Time

2024-03-21

Temporal Coverage

Single Date Time

2024-04-02

Taxonomic Coverage

Taxonomic Classification

Taxonomic Rank Name

Species

Taxonomic Rank Value

Phascolosoma (Phascolosoma) stephensoni

Common Name

Peanut worm

Taxonomic Classification

Taxonomic Rank Name

Species

Taxonomic Rank Value

Glycera tridactyla

Common Name

Bloodworm

resourceLicensesLicense Information

Intellectual Rights

This work is licensed under a

Creative Commons Attribution (CC-BY) 4.0 License

.

Resource License

License Name

Creative Commons Attribution 4.0 International

URL
https://spdx.org/licenses/CC-BY-4.0.html
Identifier

CC-BY-4.0

 

Distribution

Online

URL
https://www.mapworms.eu/

Distribution

Online

URL
https://ipt.medobis.eu/archive.do?r=micro-ct_morphological_data_glycera-tridactyla-phascolosoma-stephensoni
 

Additional Metadata

Metadata

GBIF Metadata Block

Date Stamp

2026-04-14T08:23:15Z

Citation

Keklikoglou K, Vernadou E, Mavraki D, Chatzinikolaou E, Langeneck J, Musco L (2026). Micro-CT Morphological Data of Glycera tridactyla Schmarda, 1861 and Phascolosoma (Phascolosoma) stephensoni (Stephen, 1942) species. Version 1.1. Hellenic Center for Marine Research. Sampling event dataset https://doi.org/10.25607/mqd09f accessed via GBIF.org on 2026-04-14.

Logo URL
https://www.mapworms.eu/wp-content/uploads/2022/06/mw_logo-up.png
 

Project

• Project

Title

Mimicking Adaptation and Plasticity in WORMS (MAPWORMS)

Abstract

Traditionally, robots are machines controlled by a central unit to perform predefined tasks in structured environments. MAPWORMS challenges this view by developing robots inspired by simplified marine annelids that respond to environmental stimuli and adapt through shape-morphing. These robots are built using smart shape-memory hydrogels that react to factors such as chemicals, ions, light, and pH. By combining responsive and non-responsive materials, actuation units are designed to translate stiffness changes into shape transformations. This approach integrates biological inspiration, materials science, mathematical modeling, and robotics to create adaptive machines and functional actuators.

Funding

MAPWORMS has received funding from the European Union’s Horizon Europe research and innovation programme under grant agreement No 101046846

Study Area Description

Descriptor

Mediterranean Sea

Design Description

Description

"MAPWORMS intends to: 1) study adaptation and plasticity of the body plan in Marine Annelida and shed light on the specialization process that allowed forms appeared early in the evolution of the Phylum to adapt to different environments; 2) develop a mathematical model of Annelida plasticity and adaptation to the environment through burrowing, protrusion of parts of their bodies, and morphological changes; 3)

develop smart soft materials embodying responsivity, shape morphing and self-healing capabilities, and based on DNA components; 4) develop bio-inspired modular shape morphing robots across the scale. and provides samples to WPs 3-6, each one assigned one analytical approach for the assessment of response of target organisms to experimental treatment."

 
 

Methods

• Method

Method Step

Description

WoRMS Taxon Match Tool – Verify scientific names. (www.marinespecies.org/aphia.php?p=match) OBIS Map Tool – Validate coordinates and estimate uncertainty. (obis.org/maptool/) NERC Vocabulary Server (NVS) – Assign standardized terms with IDs. (vocab.nerc.ac.uk/) LifeWatch EMODnet QC Tool – Cross-check dataset quality. (rshiny.lifewatch.be/BioCheck/)

Sampling

Study Extent

Samples for micro-CT imaging were collected between the tide level and 0.5 m depth with hammer and chisel (P. stephensoni) or using a shovel and a sieve with 1 mm mesh (G. tridactyla).

Sampling Description

Individuals of P. stephensoni were sampled on hard bottoms at Marina di Pulsano, while individuals of G. tridactyla were sampled on soft bottoms in the semi-enclosed Strea inlet, Porto Cesareo.

 
 






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