Bold Retriever
This service represents the Step 5.3 of the ARMS Workflow within the Internal Joint Initiative.
It can be run optionally on the fasta files produced by Step 5.2 (PEMA Runner) and produces an all_sequences_grouped_fasta_output.csv file as output.
Default
- Date ( Publication)
- 2021-12-06
- Status
- Under development / Pre operational
- Keywords
-
data management
- Keywords
-
metagenomics
- Keywords
-
data reformat
- Keywords
-
BOLD
- Keywords
-
ARMS
- Keywords
-
IJI
- Keywords
-
fasta
- Keywords
-
sequences
- Access constraints
- License
- Use limitation
-
The final license will be available soon.
- Other constraints
-
Open Access
Distribution Information
- OnLine resource
-
Link to the service
(
WWW:LINK-1.0-http--link
)
- OnLine resource
-
Link to the workflow
(
WWW:LINK-1.0-http--link
)
- Operation name
-
all_sequences_grouped.fasta
- Description
-
It is a fasta file produced when PEMA is run on gene 18S, gene ITS and COI sequences.
- Function
-
Input file
- Operation name
-
all_sequences_grouped.fasta_output.csv
- Function
-
Output file
- Related Services
-
Workflow Studio
- Service Category
-
data processing
- Service Language
- eng
- Service TRL
- TRL 7 – System prototype demonstration in operational environment
Metadata
- File identifier
- 243c89df-7bd1-44fe-a680-7e5e3239fe9c XML
- Metadata language
- en
- Hierarchy level
- Service
- Metadata Schema Version
-
1.0
