usdm R package - Uncertainty Analysis for Species Distribution Models

The package analyses species distribution models and evaluates their performance. It includes functions for variation partitioning, extracting variable importance, computing several metrics of model discrimination and calibration performance, optimizing prediction thresholds based on a number of criteria, performing multivariate environmental similarity surface (MESS) analysis, and displaying various analytical plots.

Date ( Publication): 2023-09-29

Status: Completed

Author

- Babak Naimi

Keywords: modelling

Keywords: biogeography

Keywords: SDM

Keywords: species distribution modelling

Keywords: model calibration

Keywords: MESS analysis

Keywords: R

Access constraints: License

Use limitation: https://cran.r-project.org/web/licenses/GPL-3

OnLine resource: CRAN link (
WWW:LINK-1.0-http--link
)

Topic Category: Species distribution

Service Category: model evaluation

Service Category: model validation

Service Category: modelling

Service Language: eng

Service TRL: TRL 9 – Actual system proven in operational environment

Service User Manual: https://cran.r-project.org/web/packages/usdm/usdm.pdf

Metadata

File identifier: 47d39881-b098-4a96-bee9-2525467d85c4 XML

Metadata language: en

Hierarchy level: Service

Metadata Schema Version: 2.1.7

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