LifeWatch ERIC Metadata Catalogue
PEMA Sequences Retriever
This service aims to download the sequences files (fasq files) that have been choosen in Step 4 (ARMS Choose and Parameterize) in order to run PEMA.
It represents the Step 5.1 of the ARMS Workflow within the Internal Joint Initiative.
Default
Identification
- Date ( Publication )
- 2021-03-29
- Date ( Creation )
- 2019-07-04
- Status
- Under development / Pre operational
- Version
- 1.0
- Keywords
- PEMA
- Keywords
- sequence file
- Keywords
- sequence retriever
- Keywords
- ARMS
- Keywords
- IJI
- Keywords
- data download
- Access constraints
- License
- Use limitation
- The final license will be available soon.
- Protocol
- DOI
- Operation name
- MasterARMS_filtered_path.csv
- Description
- The filtered ARMS file with the selected path.
- Function
- Input file
- Operation name
- fastq_sequence_files.fastq
- Description
- Sequences files downloaded from ENA in a standard format.
- Function
- Output file
- Service Category
- file download
- Service Language
- eng
- Service TRL
- TRL 7 – System prototype demonstration in operational environment
