Metadata Catalogue
PEMA Sequences Retriever
This service aims to download the sequences files (fasq files) that have been choosen in Step 4 (ARMS Choose and Parameterize) in order to run PEMA.
It represents the Step 5.1 of the ARMS Workflow within the Internal Joint Initiative.
Default
- Date ( Publication)
- 2021-03-29
- Date ( Creation)
- 2019-07-04
- Status
- Under development / Pre operational
- Keywords
-
metagenomics
- Keywords
-
data management
- Keywords
-
PEMA
- Keywords
-
sequence file
- Keywords
-
sequence retriever
- Keywords
-
ARMS
- Keywords
-
IJI
- Keywords
-
data download
- Access constraints
- License
- Use limitation
-
The final license will be available soon.
- Operation name
-
MasterARMS_filtered_path.csv
- Description
-
The filtered ARMS file with the selected path.
- Function
-
Input file
- Operation name
-
fastq_sequence_files.fastq
- Description
-
Sequences files downloaded from ENA in a standard format.
- Function
-
Output file
- Service Category
-
file download
- Service Category
-
data access
- Service Language
- eng
- Service TRL
- TRL 7 – System prototype demonstration in operational environment
- Service Helpdesk
Metadata
- File identifier
- 4d149fe6-5317-41c8-adde-f72e59d5511b XML
- Metadata language
- en
- Hierarchy level
- Service
- Metadata Schema Version
-
1.0
