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Phytoplankton data collected in Torre Guaceto, Apulia, Italy, in 2005 and 2006

The dataset is part of a Master degree thesis titled “Evaluation of transitional coastal enviroment health status: Torre Guaceto”. The dataset includes taxonomic and morphological data of phytoplankton organisms collected in Torre Guaceto (Apulia, Italy), a marine protected area, located 15 km to the North of Brindisi. Torre Guaceto is a Site of Community Importance (SIC) and Special Protected Area.

  • Default
  • Project
  • Methods
  • Data Tables

Default

Identification

Alternate Identifier

4d2457dd-b22a-46a4-9319-f407b1367b3c

Publication Date
2021-03-02
Title

Phytoplankton data collected in Torre Guaceto, Apulia, Italy, in 2005 and 2006

Abstract

The dataset is part of a Master degree thesis titled “Evaluation of transitional coastal enviroment health status: Torre Guaceto”. The dataset includes taxonomic and morphological data of phytoplankton organisms collected in Torre Guaceto (Apulia, Italy), a marine protected area, located 15 km to the North of Brindisi. Torre Guaceto is a Site of Community Importance (SIC) and Special Protected Area.

 
Dataset Creator
  University of Salento - Alberto Basset

Dataset Creator
  University of Salento - Luigi Palmisano ()

Metadata Provider
  Regional Agency for the Environmental Prevention and Protection - Elena Stanca

Dataset Contact
  University of Salento - Alberto Basset

Keywords (None)
  • Phytoplankton

  • Biodiversity

  • Size

  • Shape

  • Apulia

  • Italy

  • Torre Guaceto

Geographic Coverage

Geographic Description

Torre Guaceto is a marine protected area located in the south Adriatic Sea (Apulia, Italy).

Bounding Box

West Bounding Coordinate

17.8063

East Bounding Coordinate

17.812

North Bounding Coordinate

40.7154

South Bounding Coordinate

40.7103

Temporal Coverage

Range of Dates

Begin Date

2005-01-01

End Date

2006-12-31

License Information

Intellectual Rights

This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

 

Distribution

Online

A brief description of the the content of online URL.

DOI

URL
https://dataportal.lifewatchitaly.eu/view/urn%3Auuid%3Aeacbef1a-a804-48f4-a882-567f09651dc0

Online

A brief description of the the content of online URL.

Info and download page on LifeWatch Italy Data Portal

URL
https://dataportal.lifewatchitaly.eu/view/urn%3Auuid%3Aeacbef1a-a804-48f4-a882-567f09651dc0

Online

A brief description of the the content of online URL.

Download

URL
https://dataportal.lifewatchitaly.eu:8443/metacat/d1/mn/v2/object/urn%3Auuid%3A2cc9e582-d80d-474b-9db4-9719baf0dd50
 
 

Project

• Project

Title
Abstract

Personnel

Organization Name

Individual Name

Given Name
Surname
Position Name
 
 

Methods

• Method

Method Step

Description

Water phytoplankton samples were preserved with Lugol (15 ml/l of sample). These samples were observed with a Nikon Diaphot T300E inverted-microscope following Utermöhl’s (1985) method, at 400x magnification. Samples were divided into sub-samples and 400 organisms were counted for taxonomic identification and cell size / abundance computations in each of them. Phytoplankton counts and morphometric measurements were performed semi-automatically using a video-interactive image analysis system (L.U.C.I.A, Laboratory Imaging) connected to the microscope. Taxonomic identification was carried out using several references.

Sampling

Sampling Description

The sampling design was as follows: 2 sampling ecosystems (M=within the bay , L=offshore the bay), 2 stations for ecosystem (1, 2) and 4 replicates for each station.

Samples were collected during September and November 2005 and January 2006 using a Niskin bottle.

 
 

Data Tables

• Data Table

Name

Phytoplankton_TORRE_GUACETO_2005_2006.csv

Physical

Data Format

Externally Defined Format

Format Name

csv

Attribute List

Attribute

Name

catalogNumber

Label

Catalog Number

Definition

An identifier (preferably unique) for the record within the data set or collection.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/catalogNumber

Attribute

Name

organismQuantity

Label

Organism Quantity

Definition

A number or enumeration value for the quantity of organisms.

Standard Unit

number

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/organismQuantity

Attribute

Name

organismQuantityType

Label

Organism Quantity Type

Definition

The type of quantification system used for the quantity of organisms.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/iri/organismQuantityType

Attribute

Name

eventId

Label

Event Id

Definition

An identifier for the set of information associated with an Event (something that occurs at a place and time). May be a global unique identifier or an identifier specific to the data set.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/eventID

Attribute

Name

parentEventId

Label

Parent Event Id

Definition

An identifier for the broader Event that groups this and potentially other Events.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/parentEventID

Attribute

Name

year

Label

Year

Definition

The four-digit year in which the Event occurred, according to the Common Era Calendar.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/year

Attribute

Name

month

Label

Month

Definition

The integer month in which the Event occurred.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/month

Attribute

Name

day

Label

Day

Definition

The integer day of the month on which the Event occurred.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/day

Attribute

Name

country

Label

Country

Definition

The name of the country or major administrative unit in which the Location occurs.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/country

Attribute

Name

countryCode

Label

Country Code

Definition

The standard code for the country in which the Location occurs.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/countryCode

Attribute

Name

locality

Label

Locality

Definition

The specific description of the place. This term may contain information modified from the original to correct perceived errors or standardize the description.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/locality

Attribute

Name

decimalLatitude

Label

Decimal Latitude

Definition

The geographic latitude of the geographic center of a Location (in decimal degrees, using the spatial reference system WGS84). Positive values are north of the Equator, negative values are south of it. Legal values lie between -90 and 90, inclusive.

Standard Unit

degree

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/decimalLatitude

Attribute

Name

decimalLongitude

Label

Decimal Longitude

Definition

The geographic longitude of the geographic center of a Location (in decimal degrees, using the spatial reference system WGS84). Positive values are east of the Prime Meridian, and negative values are west of it. Legal values lie between -180 and 180, inclusive.

Standard Unit

degree

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/decimalLongitude

Attribute

Name

phylum

Label

Phylum

Definition

The full scientific name of the phylum or division in which the taxon is classified.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/phylum

Attribute

Name

class

Label

Class

Definition

The full scientific name of the class in which the taxon is classified.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/class

Attribute

Name

order

Label

Order

Definition

The full scientific name of the order in which the taxon is classified.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/order

Attribute

Name

family

Label

Family

Definition

The full scientific name of the family in which the taxon is classified.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/family

Attribute

Name

genus

Label

Genus

Definition

The full scientific name of the genus in which the taxon is classified.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/genus

Attribute

Name

providedScientificName

Label

Provided Scientific Name

Definition

The scientificname, with authorship and date information if known, as it originally appeared before of the taxonomic check.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/scientificName

Attribute

Name

scientificName

Label

Scientific Name

Definition

The full scientific name, with authorship and date information if known. When forming part of an Identification, this should be the name in lowest level taxonomic rank that can be determined. This term should not contain identification qualifications, which should instead be supplied in the IdentificationQualifier term.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/acceptedNameUsage

Attribute

Name

measurementRemarks

Label

Measurement Remarks

Definition

Comments or notes accompanying the MeasurementOrFact.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
http://rs.tdwg.org/dwc/terms/measurementRemarks

Attribute

Name

internalAndExternalStructures

Label

Internal and External Structures

Definition

Any measurable phenotypic characteristic (form and structure) of a cell or a colony, which is relatively simple to measure, easily observable and with a potentially well-defined relation to physiology and ecology.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_97be7f56

Attribute

Name

shape

Label

Shape

Definition

The approximate 3 dimensional shape of a cell, described as one or more geometric solids.

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_d8b26f7b

Attribute

Name

length

Label

Length

Definition

A 1-D extent quality which is equal to the distance between two points (PATO:0000122), indicated by alphabetical code “a; e; l”. In particular, in complex shapes, there are more than one length identified through different alphanumerical codes "a1; a2; a3; l1; l2; l3; l4".

Standard Unit

micrometer

Attribute

Name

width

Label

Width

Definition

A 1-D extent quality which is equal to the distance from one side of an object to another side which is opposite (PATO:0000921), indicated by alphabetical code “b; d”. In particular, in complex shapes, there are more than one width identified through different alphanumerical codes "b1; b2; b3; b4; d1; d11; d2; d22; d3; d33; d4; d44".

Standard Unit

micrometer

Attribute

Name

a

Label

Length-a

Definition

A 1-D extent quality which is equal to the distance between two points (PATO:0000122), indicated by alphabetical code “a; e; l”. In particular, in complex shapes, there are more than one length identified through different alphanumerical codes "a1; a2; a3; l1; l2; l3; l4".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_748e6e00

Attribute

Name

b

Label

Width-b

Definition

A 1-D extent quality which is equal to the distance from one side of an object to another side which is opposite (PATO:0000921), indicated by alphabetical code “b; d”. In particular, in complex shapes, there are more than one width identified through different alphanumerical codes "b1; b2; b3; b4; d1; d11; d2; d22; d3; d33; d4; d44".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_567e32a9

Attribute

Name

c

Label

Thickness-c

Definition

A 1-D extent quality which is equal to the dimension through an object as opposed to its length or width (PATO:0000915), indicated by alphabetical code “c; h”. In particular, in complex shapes, there are more than one thickness identified through different alphanumerical codes "c1; c2; c3; h1; h2; h3; h4".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_57f1a339

Attribute

Name

d

Label

Width-d

Definition

A 1-D extent quality which is equal to the distance from one side of an object to another side which is opposite (PATO:0000921), indicated by alphabetical code “b; d”. In particular, in complex shapes, there are more than one width identified through different alphanumerical codes "b1; b2; b3; b4; d1; d11; d2; d22; d3; d33; d4; d44".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_567e32a9

Attribute

Name

h

Label

Thickness-h

Definition

A 1-D extent quality which is equal to the dimension through an object as opposed to its length or width (PATO:0000915), indicated by alphabetical code “c; h”. In particular, in complex shapes, there are more than one thickness identified through different alphanumerical codes "c1; c2; c3; h1; h2; h3; h4".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_57f1a339

Attribute

Name

a1

Label

Length-a1

Definition

A 1-D extent quality which is equal to the distance between two points (PATO:0000122), indicated by alphabetical code “a; e; l”. In particular, in complex shapes, there are more than one length identified through different alphanumerical codes "a1; a2; a3; l1; l2; l3; l4".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_748e6e00

Attribute

Name

b1

Label

Width-b1

Definition

A 1-D extent quality which is equal to the distance from one side of an object to another side which is opposite (PATO:0000921), indicated by alphabetical code “b; d”. In particular, in complex shapes, there are more than one width identified through different alphanumerical codes "b1; b2; b3; b4; d1; d11; d2; d22; d3; d33; d4; d44".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_567e32a9

Attribute

Name

c1

Label

Thickness-c1

Definition

A 1-D extent quality which is equal to the dimension through an object as opposed to its length or width (PATO:0000915), indicated by alphabetical code “c; h”. In particular, in complex shapes, there are more than one thickness identified through different alphanumerical codes "c1; c2; c3; h1; h2; h3; h4".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_57f1a339

Attribute

Name

d1

Label

Width-d1

Definition

A 1-D extent quality which is equal to the distance from one side of an object to another side which is opposite (PATO:0000921), indicated by alphabetical code “b; d”. In particular, in complex shapes, there are more than one width identified through different alphanumerical codes "b1; b2; b3; b4; d1; d11; d2; d22; d3; d33; d4; d44".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_567e32a9

Attribute

Name

h1

Label

Thickness-h1

Definition

A 1-D extent quality which is equal to the dimension through an object as opposed to its length or width (PATO:0000915), indicated by alphabetical code “c; h”. In particular, in complex shapes, there are more than one thickness identified through different alphanumerical codes "c1; c2; c3; h1; h2; h3; h4".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_57f1a339

Attribute

Name

a2

Label

Length-a2

Definition

A 1-D extent quality which is equal to the distance between two points (PATO:0000122), indicated by alphabetical code “a; e; l”. In particular, in complex shapes, there are more than one length identified through different alphanumerical codes "a1; a2; a3; l1; l2; l3; l4".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_748e6e00

Attribute

Name

b2

Label

Width-b2

Definition

A 1-D extent quality which is equal to the distance from one side of an object to another side which is opposite (PATO:0000921), indicated by alphabetical code “b; d”. In particular, in complex shapes, there are more than one width identified through different alphanumerical codes "b1; b2; b3; b4; d1; d11; d2; d22; d3; d33; d4; d44".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_567e32a9

Attribute

Name

c2

Label

Thickness-c2

Definition

A 1-D extent quality which is equal to the dimension through an object as opposed to its length or width (PATO:0000915), indicated by alphabetical code “c; h”. In particular, in complex shapes, there are more than one thickness identified through different alphanumerical codes "c1; c2; c3; h1; h2; h3; h4".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_57f1a339

Attribute

Name

d2

Label

Width-d2

Definition

A 1-D extent quality which is equal to the distance from one side of an object to another side which is opposite (PATO:0000921), indicated by alphabetical code “b; d”. In particular, in complex shapes, there are more than one width identified through different alphanumerical codes "b1; b2; b3; b4; d1; d11; d2; d22; d3; d33; d4; d44".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_567e32a9

Attribute

Name

h2

Label

Thickness-h2

Definition

A 1-D extent quality which is equal to the dimension through an object as opposed to its length or width (PATO:0000915), indicated by alphabetical code “c; h”. In particular, in complex shapes, there are more than one thickness identified through different alphanumerical codes "c1; c2; c3; h1; h2; h3; h4".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_57f1a339

Attribute

Name

a3

Label

Length-a3

Definition

A 1-D extent quality which is equal to the distance between two points (PATO:0000122), indicated by alphabetical code “a; e; l”. In particular, in complex shapes, there are more than one length identified through different alphanumerical codes "a1; a2; a3; l1; l2; l3; l4".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_748e6e00

Attribute

Name

b3

Label

Width-b3

Definition

A 1-D extent quality which is equal to the distance from one side of an object to another side which is opposite (PATO:0000921), indicated by alphabetical code “b; d”. In particular, in complex shapes, there are more than one width identified through different alphanumerical codes "b1; b2; b3; b4; d1; d11; d2; d22; d3; d33; d4; d44".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_567e32a9

Attribute

Name

c3

Label

Thickness-c3

Definition

A 1-D extent quality which is equal to the dimension through an object as opposed to its length or width (PATO:0000915), indicated by alphabetical code “c; h”. In particular, in complex shapes, there are more than one thickness identified through different alphanumerical codes "c1; c2; c3; h1; h2; h3; h4".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_57f1a339

Attribute

Name

d3

Label

Width-d3

Definition

A 1-D extent quality which is equal to the distance from one side of an object to another side which is opposite (PATO:0000921), indicated by alphabetical code “b; d”. In particular, in complex shapes, there are more than one width identified through different alphanumerical codes "b1; b2; b3; b4; d1; d11; d2; d22; d3; d33; d4; d44".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_567e32a9

Attribute

Name

h3

Label

Thickness-h3

Definition

A 1-D extent quality which is equal to the dimension through an object as opposed to its length or width (PATO:0000915), indicated by alphabetical code “c; h”. In particular, in complex shapes, there are more than one thickness identified through different alphanumerical codes "c1; c2; c3; h1; h2; h3; h4".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_57f1a339

Attribute

Name

d4

Label

Width-d4

Definition

A 1-D extent quality which is equal to the distance from one side of an object to another side which is opposite (PATO:0000921), indicated by alphabetical code “b; d”. In particular, in complex shapes, there are more than one width identified through different alphanumerical codes "b1; b2; b3; b4; d1; d11; d2; d22; d3; d33; d4; d44".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_567e32a9

Attribute

Name

h4

Label

Thickness-h4

Definition

A 1-D extent quality which is equal to the dimension through an object as opposed to its length or width (PATO:0000915), indicated by alphabetical code “c; h”. In particular, in complex shapes, there are more than one thickness identified through different alphanumerical codes "c1; c2; c3; h1; h2; h3; h4".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_57f1a339

Attribute

Name

e

Label

Length-e

Definition

A 1-D extent quality which is equal to the distance between two points (PATO:0000122), indicated by alphabetical code “a; e; l”. In particular, in complex shapes, there are more than one length identified through different alphanumerical codes "a1; a2; a3; l1; l2; l3; l4".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_748e6e00

Attribute

Name

l

Label

Length-l

Definition

A 1-D extent quality which is equal to the distance between two points (PATO:0000122), indicated by alphabetical code “a; e; l”. In particular, in complex shapes, there are more than one length identified through different alphanumerical codes "a1; a2; a3; l1; l2; l3; l4".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_748e6e00

Attribute

Name

l1

Label

Length-l1

Definition

A 1-D extent quality which is equal to the distance between two points (PATO:0000122), indicated by alphabetical code “a; e; l”. In particular, in complex shapes, there are more than one length identified through different alphanumerical codes "a1; a2; a3; l1; l2; l3; l4".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_748e6e00

Attribute

Name

l2

Label

Length-l2

Definition

A 1-D extent quality which is equal to the distance between two points (PATO:0000122), indicated by alphabetical code “a; e; l”. In particular, in complex shapes, there are more than one length identified through different alphanumerical codes "a1; a2; a3; l1; l2; l3; l4".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_748e6e00

Attribute

Name

l3

Label

Length-l3

Definition

A 1-D extent quality which is equal to the distance between two points (PATO:0000122), indicated by alphabetical code “a; e; l”. In particular, in complex shapes, there are more than one length identified through different alphanumerical codes "a1; a2; a3; l1; l2; l3; l4".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_748e6e00

Attribute

Name

l4

Label

Length-l4

Definition

A 1-D extent quality which is equal to the distance between two points (PATO:0000122), indicated by alphabetical code “a; e; l”. In particular, in complex shapes, there are more than one length identified through different alphanumerical codes "a1; a2; a3; l1; l2; l3; l4".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_748e6e00

Attribute

Name

d11

Label

Width-d11

Definition

A 1-D extent quality which is equal to the distance from one side of an object to another side which is opposite (PATO:0000921), indicated by alphabetical code “b; d”. In particular, in complex shapes, there are more than one width identified through different alphanumerical codes "b1; b2; b3; b4; d1; d11; d2; d22; d3; d33; d4; d44".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_567e32a9

Attribute

Name

d22

Label

Width-d22

Definition

A 1-D extent quality which is equal to the distance from one side of an object to another side which is opposite (PATO:0000921), indicated by alphabetical code “b; d”. In particular, in complex shapes, there are more than one width identified through different alphanumerical codes "b1; b2; b3; b4; d1; d11; d2; d22; d3; d33; d4; d44".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_567e32a9

Attribute

Name

d33

Label

Width-d33

Definition

A 1-D extent quality which is equal to the distance from one side of an object to another side which is opposite (PATO:0000921), indicated by alphabetical code “b; d”. In particular, in complex shapes, there are more than one width identified through different alphanumerical codes "b1; b2; b3; b4; d1; d11; d2; d22; d3; d33; d4; d44".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_567e32a9

Attribute

Name

d44

Label

Width-d44

Definition

A 1-D extent quality which is equal to the distance from one side of an object to another side which is opposite (PATO:0000921), indicated by alphabetical code “b; d”. In particular, in complex shapes, there are more than one width identified through different alphanumerical codes "b1; b2; b3; b4; d1; d11; d2; d22; d3; d33; d4; d44".

Standard Unit

micrometer

Annotation

Property URI
http://purl.obolibrary.org/obo/IAO_0000136
Value URI
https://kos.lifewatch.eu/thesauri/traits/c_567e32a9

Attribute

Name

volumeEqSphere

Label

Volume Equivalent Sphere

Definition

Volume Equivalent Sphere (cubic micrometers)

Standard Unit

dimensionless

Attribute

Name

volumeEqCylinder

Label

Volume Equivalent Cylinder

Definition

Volume Equivalent Cylinder (cubic micrometers).

Standard Unit

dimensionless

Attribute

Name

volumeOfSedimentationChamber

Label

Volume Of Sedimentation Chamber

Definition

The volume of water sample used for sedimentation expressed in milliliter.

Standard Unit

milliliter

Attribute

Name

transectCounting

Label

Transect Counting

Definition

The number of counted fields or diametral transects or the surface of the sedimentation chamber.

Standard Unit

number

Attribute

Name

eunisHabitatsTypeName

Label

Eunis Habitats Type Name

Definition

Assignment of the habitat type name based on the EUNIS habitat classification.

Attribute

Name

classCode

Label

Class Code

Definition

In house numerical code linking taxonomic information to morphological computational volume and area calculation.

Standard Unit

dimensionless