LifeWatch ERIC Metadata Catalogue
Species_occ.csv
This is the output file of Step 1 (Metabarcoding Runner) and the input file of Step 2 (Metabarcoding Syntax Normalizer) for the Metabarcoding workflow.
This file is a taxa table containing the number of DNA sequences assigned to each taxon detected using High Throughput Sequencing of environmental DNA samples.
Default
Identification
- Alternate Identifier
- 52be722a-4372-40fb-a91a-cf11332f80be
- Publication Date
- 2021-03-23
- Title
- Species_occ.csv
- Abstract
-
This is the output file of Step 1 (Metabarcoding Runner) and the input file of Step 2 (Metabarcoding Syntax Normalizer) for the Metabarcoding workflow.
This file is a taxa table containing the number of DNA sequences assigned to each taxon detected using High Throughput Sequencing of environmental DNA samples.
- Dataset Creator
- Dataset Contact
- Keywords ( )
-
- Taxa occurrence
- Taxonomic identification
- Taxonomic rank
- Geographic coordinate
- Investigator name
- eDNA detections
- Metabarcoding
- IJI
Taxonomic Coverage
No information provided.
License Information
- Intellectual Rights
Resource License
- License Name
- The final license will be available soon.
- URL
Distribution
Online
- A brief description of the the content of online URL.
- Dataset
Data Tables
Data Tables
• Data Table
- Name
- Species_occ
Physicaldocument
Data Format
Externally Defined Format
- Format Name
- CSV
Attribute List
Attribute
- Name
- occurrenceID
- Label
- Occurrence identifier
- Definition
- Unique identifier assigned to each taxon occurrence per eDNA sample processed
- Standard Unit
Attribute
- Name
- scientificName
- Label
- Taxon designation
- Definition
- Scientific name of the taxon detected
- Standard Unit
Attribute
- Name
- kingdom
- Label
- Kingdom
- Definition
- Specifies the kingdom of the taxon identified (e.g. Animalia, Plantae, Fungi etc..)
- Standard Unit
Attribute
- Name
- taxonRank
- Label
- Taxon rank
- Definition
- Specifies the taxonomic rank of the taxon identified (e.g. species, genus, family, order, etc..)
- Standard Unit
Attribute
- Name
- decimalLatitude
- Label
- Latitude
- Definition
- Latitude of the eDNA sampling site where the taxon was identified
- Standard Unit
- Decimal Degrees in WGS 84 coordinate system (EPSG:4326)
Attribute
- Name
- decimalLongitude
- Label
- Longitude
- Definition
- Longitude of the eDNA sampling site where the taxon was identified
- Standard Unit
- Decimal Degrees in WGS 84 coordinate system (EPSG:4326)
Attribute
- Name
- eventDate
- Label
- eDNA sampling date
- Definition
- Date of eDNA sample collection
- Standard Unit
- DD/MM/YYYY
Attribute
- Name
- recordedBy
- Label
- Name of the investigator (sampling)
- Definition
- Name of the investigator who carried out the eDNA sampling
- Standard Unit
Attribute
- Name
- identifiedBy
- Label
- Name of the investigator (identification)
- Definition
- Name of the investigator who carried out the eDNA sequencing/analysis
- Standard Unit
