Metabarcoding GBIF NIS Verifier
This service aims at checking which taxa detected and identified from eDNA metabarcoding sequences are listed as NIS and which taxa are not (i.e. native or unrecorded NIS). This service uses available GBIF (Global Biodiversity Information Facility) records of NIS for each Country provided by the Invasive Species Specialist Group (ISSG).
it checks if a species is present in the checklist and if this is the case, the species is flagged as being invasive for that country by adding 1 (yes) or 0 (no) to the column isInChecklist of the data frame, and the checklist key or a note to the ref_checklistKey column, for the corresponding cases.
It is part of the Metabarcoding workflow of the Internal Joint Initiative available here: <a href=" https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/67885733-f393-4a55-bdaa-999d0f3f83a0." target="_blank"> https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/67885733-f393-4a55-bdaa-999d0f3f83a0.</a>
Default
- Date ( Publication)
- 2021-03-23
- Date ( Creation)
- 2019-07-04
- Status
- Completed
- Keywords
-
biogeography
- Keywords
-
metagenomics
- Keywords
-
remote sensing
- Keywords
-
Non-native Invasive Species
- Keywords
-
National checklist
- Keywords
-
eDNA detections
- Keywords
-
Taxa occurrence
- Keywords
-
Metabarcoding
- Keywords
-
IJI
- Access constraints
- License
- Use limitation
- Other constraints
-
Open Access
Distribution Information
- OnLine resource
-
Link to the service
(
WWW:LINK-1.0-http--link
)
- OnLine resource
-
Link to the workflow
(
WWW:LINK-1.0-http--link
)
- Related Services
-
Workflow Studio
- Service Category
-
data validation
- Service Category
-
data analysis
- Service Category
-
data processing
- Service Language
- eng
- Service TRL
- TRL 7 – System prototype demonstration in operational environment
- Service Helpdesk
Metadata
- File identifier
- 5aacde7d-3698-4f23-a2d6-73e4d66fb48a XML
- Metadata language
- en
- Hierarchy level
- Service
- Metadata Schema Version
-
1.0
