Reference_db

This is one of the three input files required for running Step 1 (Metabarcoding Runner) of the Metabarcoding workflow. This file contains a list of species and reference genetic sequences that will be used for the taxonomic assignment of eDNA metabarcoding sequences. The other two input files for Step 1 are the "Fastq" file with sequences generated from High Throughput Sequencing of eDNA samples and the "Sample_metadata" with eDNA samples information.

Identification

Alternate Identifier: 64b81b5f-c788-45c6-935c-b99f3fcf9535

Publication Date: 2021-03-23

Title: Reference_db

Abstract: This is one of the three input files required for running Step 1 (Metabarcoding Runner) of the Metabarcoding workflow. This file contains a list of species and reference genetic sequences that will be used for the taxonomic assignment of eDNA metabarcoding sequences. The other two input files for Step 1 are the "Fastq" file with sequences generated from High Throughput Sequencing of eDNA samples and the "Sample_metadata" with eDNA samples information.

Dataset Creator: CIBIO-InBIO - Ana Filipa Filipe (Researcher)

Dataset Contact: CIBIO-InBIO - Ana Filipa Filipe (Researcher)

Keywords ()

DNA sequences
Genetic sequences
Reference sequences
Metabarcoding
IJI

Taxonomic Coverage

No information provided.

License Information

Intellectual Rights

• Data Table

Name: Reference database

Physical

Data Format

Externally Defined Format

Format Name: FASTA

Attribute List