Reference_db

This is one of the three input files required for running Step 1 (Metabarcoding Runner) of the Metabarcoding workflow. This file contains a list of species and reference genetic sequences that will be used for the taxonomic assignment of eDNA metabarcoding sequences. The other two input files for Step 1 are the "Fastq" file with sequences generated from High Throughput Sequencing of eDNA samples and the "Sample_metadata" with eDNA samples information.

Default

Identification

Alternate Identifier
64b81b5f-c788-45c6-935c-b99f3fcf9535
Publication Date
2021-03-23
Title
Reference_db
Abstract
This is one of the three input files required for running Step 1 (Metabarcoding Runner) of the Metabarcoding workflow. This file contains a list of species and reference genetic sequences that will be used for the taxonomic assignment of eDNA metabarcoding sequences. The other two input files for Step 1 are the "Fastq" file with sequences generated from High Throughput Sequencing of eDNA samples and the "Sample_metadata" with eDNA samples information.
 
Dataset Creator
  CIBIO-InBIO - Ana Filipa Filipe (Researcher )
Dataset Contact
  CIBIO-InBIO - Ana Filipa Filipe (Researcher )
Keywords ( )
  • DNA sequences
  • Genetic sequences
  • Reference sequences
  • Metabarcoding
  • IJI

Taxonomic Coverage

No information provided.

License Information

Intellectual Rights

Resource License

License Name
The final license will be available soon.
URL
 
 
 

Data Tables

Data Tables

• Data Table

Name
Reference database

Physicaldocument

Data Format

Externally Defined Format

Format Name
FASTA

Attribute List

No information provided.
 
 

Not available