Metadata Catalogue
The InBIO Barcoding Initiative Database: A taxonomic revision of the Western Palaearctic genus Cacochroa Heinemann, 1870 (Lepidoptera, Depressariidae)
The dataset contains 11 records of moth specimens (Lepidoptera, Depressariidae) collected from 1988 to 2016 in seven South European and North African countries. The study of these specimens resulted in the description of a new genus, Rosetea Corley amp; Ferreira, 2019. The new genus contains two species previously placed in the genus Cacochroa Heinemann, 1870, Rosetea corfuella (Lvovsky, 2000) and R. rosetella (Corley, 2018), but also a new species, R. sara Corley amp; Ferreira, 2019, described based on differences found in the male and female genitalia and on DNA barcodes in Corley et al. (2019). Captured specimens were identified to species level and preserved in 96% ethanol, with one exception kept in dry storage. A tissue sample, one leg, was collected from each individual, from which DNA was extracted. The DNA barcoding of these specimens was conducted within the InBIO Barcoding Initiative (IBI), funded by EnvMetaGen and PORBIOTA projects. DNA barcode sequences were deposited in BOLD (Barcode of Life Data System) online database. DNA extracts are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources).
Default
Identification
- Alternate Identifier
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900a387b-cf8b-479b-b983-69fa973f3bcd
- Publication Date
- 2021-01-05
- Title
-
The InBIO Barcoding Initiative Database: A taxonomic revision of the Western Palaearctic genus Cacochroa Heinemann, 1870 (Lepidoptera, Depressariidae)
- Abstract
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The dataset contains 11 records of moth specimens (Lepidoptera, Depressariidae) collected from 1988 to 2016 in seven South European and North African countries. The study of these specimens resulted in the description of a new genus, Rosetea Corley amp; Ferreira, 2019. The new genus contains two species previously placed in the genus Cacochroa Heinemann, 1870, Rosetea corfuella (Lvovsky, 2000) and R. rosetella (Corley, 2018), but also a new species, R. sara Corley amp; Ferreira, 2019, described based on differences found in the male and female genitalia and on DNA barcodes in Corley et al. (2019). Captured specimens were identified to species level and preserved in 96% ethanol, with one exception kept in dry storage. A tissue sample, one leg, was collected from each individual, from which DNA was extracted. The DNA barcoding of these specimens was conducted within the InBIO Barcoding Initiative (IBI), funded by EnvMetaGen and PORBIOTA projects. DNA barcode sequences were deposited in BOLD (Barcode of Life Data System) online database. DNA extracts are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources).
- purpose
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The InBIO Barcoding Initiative (IBI) aims to develop a reference collection of DNA barcoding sequences primarily covering Portuguese invertebrate taxa providing a tool in ecological studies.
- Dataset Language
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ENGLISH
- Dataset Creator
- Dataset Creator
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CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto - Sónia Ferreira (Post-Doc Researcher)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Vairão
,Porto
,4485-661
,PORTUGAL
- Dataset Creator
-
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto - Pedro Sousa (Post-Doc Researcher)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Vairão
,Porto
,4485-661
,PORTUGAL
- Dataset Creator
-
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto - Pedro Beja (Coordinating Researcher)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Vairão
,Porto
,4485-661
,PORTUGAL
- Metadata Provider
- Metadata Provider
-
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto - Sónia Ferreira (Post-Doc Researcher)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Vairão
,Porto
,4485-661
,PORTUGAL
- Metadata Provider
-
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto - Pedro Sousa (Coordinating Researcher)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Vairão
,Porto
,4485-661
,PORTUGAL
- Metadata Provider
-
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto - Pedro Beja (Coordinating Researcher)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Vairão
,Porto
,4485-661
,PORTUGAL
- Dataset Contact
-
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto - Pedro Beja (Coordinating Researcher)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Vairão
,Porto
,4485-661
,PORTUGAL
- Dataset Contact
-
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto - Sónia Ferreira (Post-Doc Researcher)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Vairão
,Porto
,4485-661
,PORTUGAL
- Keywords (n/a)
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Lepidoptera
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- Keywords (n/a)
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Species
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- Keywords (GBIF Dataset Type Vocabulary: http://rs.gbif.org/vocabulary/gbif/dataset_type.xml)
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Occurrence
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- Keywords (n/a)
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Cytochrome c oxidase I (COI)
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- Keywords (n/a)
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DNA barcode
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- Keywords (n/a)
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Europe
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- Keywords (n/a)
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Africa
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- Keywords (GBIF Dataset Type Vocabulary: http://rs.gbif.org/vocabulary/gbif/dataset_type_2015-07-10.xml)
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-
Occurrence
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Geographic Coverage
- Geographic Description
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Southern Europe and North Africa
Bounding Box
- West Bounding Coordinate
-
-8.999
- East Bounding Coordinate
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26.678
- North Bounding Coordinate
-
43.52
- South Bounding Coordinate
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31.214
Temporal Coverage
Range of Dates
- Begin Date
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1988-05-05
- End Date
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2016-08-14
Taxonomic Coverage
- General Taxonomic Coverage
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This dataset is composed of data relating to 11 Lepidoptera specimens. All specimens were determined to species level.Five species belonging to two genera, Cacochroa Heinemann, 1870 and Rosetea Corley Ferreira 2019, are represented in the dataset. Both genera belong to the family Depressariidae.
Taxonomic Classification
- Taxonomic Rank Name
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Kingdom
- Taxonomic Rank Value
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Animalia
Taxonomic Classification
- Taxonomic Rank Name
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Phylum
- Taxonomic Rank Value
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Arthropoda
Taxonomic Classification
- Taxonomic Rank Name
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Class
- Taxonomic Rank Value
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Insecta
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Lepidoptera
Taxonomic Classification
- Taxonomic Rank Name
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Family
- Taxonomic Rank Value
-
Depressariidae
License Information
- Intellectual Rights
-
This work is licensed under a
Creative Commons Attribution (CC-BY) 4.0 License
.
Distribution
Additional Metadata
Metadata
GBIF Metadata Block
- Date Stamp
-
2021-11-29T09:05:37Z
- Citation
-
Corley M, Ferreira S, Sousa P, Beja P (2021). The InBIO Barcoding Initiative Database: A taxonomic revision of the Western Palaearctic genus Cacochroa Heinemann, 1870 (Lepidoptera, Depressariidae). Version 1.2. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Occurrence dataset https://doi.org/10.15468/g5hudd accessed via GBIF.org on 2021-11-29.
- Bibliography
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Corley, M.F.V. (2018). Taxonomic notes on Portuguese Microlepidoptera I. Cacochroa rosetella Corley, sp. n. (Lepidoptera: Depressariidae, Cryptolechiinae). SHILAP Revista lepidopterología, 46 (181), 75−79.
Corley, M. F. V. Ferreira, S. (2019). A taxonomic revision of the Western Palaearctic genus Cacochroa Heinemann, 1870 (Lepidoptera, Depressariidae, Cryptolechiinae) with description of a new genus and a new species. Zootaxa, 4683 (2): 197–214.
Heinemann, H. (1870). Die Schmetterlinge Deutschlands und der Schweiz. Kleinschmetterlinge, Series 2, 2 (1). F. Vieweg, Braunschweig, 388 pp.
Herrich-Schäffer, G.A.W. ([1853−1855] 1847−1855). Systematische Bearbeitung der Schmetterlinge von Europa, zugleich als Text, Revision und Supplement zu Jakob Hübner’s Sammlung europäischen Schmetterlinge. 5. Die Schaben und Federmotten. In Commission bei G. J. Manz, Regensburg, 394 pp. [Tineides, 124 p., Pterophides, 7 pls., Micropteryges, 1 pl.]
Lvovsky, A.L. (1981). Oecophoridae. In Medvedev, G.S. (Ed.), Keys to the Insects of the European part of the USSR, IV (2), 1−787.
Lvovsky, A.L. (2000). Cacochroa corfuella sp. n. from Greece (Lepidoptera: Oecophoridae). Zoosystematica rossica, 8, 335−336.
Rebel, H. (1901). Pyralidae—Micropterygidae. In: Staudinger, O. Rebel, H. (Eds.), Catalog der Lepidopteren des Palaearctischen Faunengebietes. 2. R. Friedländer Sohn, Berlin, pp. 1–368.
- Collection
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CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal
4ec2b246-f5fa-4b90-9a8d-ddafc2a3f970
InBIO Barcoding Initiative
- Speciment Preservation Method
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ALCOHOL
- JGTI Curatorial Unit
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Voucher tube
1
10
- JGTI Curatorial Unit
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DNA extractions
1
10
Project
• Project
- Title
-
The InBIO Barcoding Initiative Database: A taxonomic revision of the Western Palaearctic genus Cacochroa Heinemann, 1870 (Lepidoptera, Depressariidae)
Personnel
Individual Name
- Given Name
-
Pedro
- Surname
-
Beja
- User ID
-
0000-0001-8164-0760
- Role
-
AUTHOR
Personnel
Individual Name
- Given Name
-
Martin
- Surname
-
Corley
- User ID
-
0000-0003-4240-8007
- Role
-
AUTHOR
Personnel
Individual Name
- Given Name
-
Sónia
- Surname
-
Ferreira
- User ID
-
0000-0002-6884-3966
- Role
-
AUTHOR
Personnel
Individual Name
- Given Name
-
Pedro
- Surname
-
Sousa
- User ID
-
0000-0002-5859-9656
- Role
-
ORIGINATOR
- Abstract
-
The InBIO Barcoding Initiative aims to develop a reference collection of DNA barcoding sequences covering Portuguese invertebrate taxa. Within the project, a special focus is afforded to insects, given their relevance to food webs, ecosystems functioning, high diversity and limited number of DNA barcoding sequences of interest.
- Funding
-
InBIO Barcoding Initiative is funded by the European Union’s Horizon 2020 Research and Innovation programme under grant agreement No 668981 and by the project PORBIOTA — Portuguese E-Infrastructure for Information and Research on Biodiversity (POCI-01-0145-FEDER-022127), supported by Operational Thematic Program for Competitiveness and Internationalization (POCI), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (FEDER).
Study Area Description
- Descriptor
-
Specimens were collected in five European countries, Bulgaria, France, Greece, Italy and Portugal and in two African countries, Morocco and Tunisia, in a total of ten different localities. Sampling was conducted from 1988 to 2016.
Design Description
- Description
-
Specimens in this dataset were collected in field work carried out between 1988 and 2016. Specimens were captured by ten different collectors.
Methods
• Method
Method Step
- Description
-
Sampling of specimens was done at ten different localities of seven different European and African countries., collected between 1988 and 2016.
Method Step
- Description
-
The captured specimen was preserved in 96% ethanol with a single exception kept in dry storage.
Method Step
- Description
-
The specimen was morphologically identified using a binocular stereoscopic microscope and resorting to available literature (Corley, 2018; Corley. Ferreira 2019; Heinemann, 1870; Herrich-Schäffer, [1853−1855] 1847−1855; Lvovsky, 1981 and 2000; Rebel, 1901).
Method Step
- Description
-
DNA barcodes were sequenced from all specimens. For this, one leg was removed from each individual from which a 658 bp COI DNA barcode fragment was extracted, amplified and sequenced.
Method Step
- Description
-
The obtained sequences were submitted to BOLD database and the specimens’ morphological identification was contrasted with the results of the BLAST of the newly generated DNA barcode in BOLD Identification Engine.
Method Step
- Description
-
Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 ( http://openrefine.org/).
Sampling
- Study Extent
-
Specimens were collected in ten different localities of seven different countries, most of them bordering the Mediterranean Sea. Sampling was conducted from 1988 to 2016.
- Sampling Description
-
Sampling of specimens was done at ten different localities of seven different countries, Bulgaria, France, Greece, Italy and Portugal in Europe and Morocco and Tunisia in in two Africa. Sampling was conducted between 1988 to 2016. Captured specimens were preserved in 96% ethanol, with one exception kept in dry storage. Preserved specimens are deposited in two Museums: Natural History Museum, London and the Natural History Museum of Denmark, Zoological Collection, University of Copenhagen and in three research collections: Martin Corley’s, Zdenko Tokár’s and Giorgio Baldizzone’s.
qualityControl
- Description
-
The DNA barcoded specimen morphological identification was contrasted with the results of the Blast of the newly generated DNA barcode in BOLD Identification Engine. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 ( http://openrefine.org/).