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Template output csv file for Biodiversity data from excel retriever - data

This is an example of the species occurrence data from the <a href=" https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/52472525-ddf7-4521-abc9-f4b8a98b82ae" target="_blank">Biodiversity Time Series Analyses from European Marine Ecosystems workflow</a>, produced as output of the <a href=" https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/d9fc8450-10d0-4774-92af-257a1fc4e488" target="_blank">Biodiversity data from excel retriever</a>.

Default

IdentificationAbout this resource

Alternate Identifier

9f1f4f08-7bf3-45de-8fca-83b47619148e

Publication Date
2025-11-05
Title

Template output csv file for Biodiversity data from excel retriever - data

Short Name
Abstract

This is an example of the species occurrence data from the <a href=" https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/52472525-ddf7-4521-abc9-f4b8a98b82ae" target="_blank">Biodiversity Time Series Analyses from European Marine Ecosystems workflow</a>, produced as output of the <a href=" https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/d9fc8450-10d0-4774-92af-257a1fc4e488" target="_blank">Biodiversity data from excel retriever</a>.

Dataset Language

en

 
Dataset Creator
  Senckenberg Society For Nature Research - Andrés Peredo Arce (Postdoctoral researcher)

Metadata Provider
  LifeWatch ERIC - Lucia Vaira (Service Centre ICT Coordinator)

Dataset Contact
  Senckenberg Society For Nature Research - Andrés Peredo Arce (Postdoctoral researcher)

Keywords (None)
  • taxonomy

  • sampling

  • Marco-Bolo

resourceLicensesLicense Information

Intellectual Rights

MIT License

 

Distribution

Online

A brief description of the the content of online URL.

Sample output data CSV of Biodiversity data from excel retriever

URL
https://github.com/QCDIS/Biodiversity_time_series_analyses_from_European_marine_ecosystems/blob/main/data/data.csv
 
 

Project

• Project

Title

Marine Coastal Biodiversity Long-term Observations (MARCO-BOLO): Strengthening biodiversity observation in support of decision making

Abstract

MARCO-BOLO (MBO) aims to structure and strengthen European coastal and marine biodiversity observation capabilities, linking them to global efforts to understand and restore ocean health, hence ensuring that outputs respond to explicit stakeholder needs from policy, planning and industry. To this end MBO will establish and engage with a Community of Practice (CoP) to determine end-user needs with the aim of optimising marine data flows, knowledge uptake, and improving governance based on biodiversity observations. By exploiting synergies with concurrent projects MBO will develop and demonstrate new autonomous technology for biodiversity mapping and monitoring, and data streams from remote sensing, eDNA, robotics, optical and acoustic observations. Protocols for eDNA-based biodiversity observations are established and validated across applications, taxa and ecosystems. The sequence of the analytical and technical processes for the different use cases will be incorporated into operational Essential Ocean Variables (EOVs) and Essential Biodiversity Variables (EBVs) and included into online reusable workflows, contributing to the free and open access of EU and global biodiversity information facilities, and to support major EU biodiversity directives and global initiatives. The project partnership will leverage its international activities (MBON, GOOS, OBIS) and participation in UN Ocean Decade Programmes (Marine Life 2030, OBON, ODIS, Ocean Practices for the Decade) to align the MBO work programme to global CoP, ensuring European participation and leadership in global biodiversity monitoring and global science. MBO results will be designed to build upon existing capability and infrastructures, and to be relevant to existing frameworks so that outputs can be easily integrated into national, regional (EU and adjacent sea basins), and global observation systems, with no delay ensuring the reusability of the investments Europe is already making in data generation.

Personnel

Organization Name

Individual Name

Given Name
Surname
Position Name
 
 

Data Tables

• Data Table

Name

Data

Physical

Data Format

Externally Defined Format

Format Name

csv

Attribute List

Attribute

Name

datecollected

Label

Date of collection

Definition

The date in which the sample has been collected.

Standard Unit

Attribute

Name

siteid

Label

Site identifier

Definition

The site-specific (e.g. alpha-numeric) identifier for each sampling location.

Standard Unit

Attribute

Name

sampleid

Label

Sample ID

Definition

The identifier of the collected sample.

Standard Unit

Attribute

Name

basisofrecord

Label

Basis of record

Definition

The specific nature of the data record.

Standard Unit

Attribute

Name

minimumdepthinmeters

Label

Minimum depth in meters

Definition

The lesser depth of a range of depth below the local surface, in meters.

Standard Unit

Attribute

Name

maximumdepthinmeters

Label

Maximum depth in meters

Definition

The greater depth of a range of depth below the local surface, in meters.

Standard Unit

Attribute

Name

taxaname

Label

Taxon name

Definition

The formal scientific name assigned to a taxon.

Standard Unit

Attribute

Name

taxanameid

Label

Taxon name id

Definition

The identifier for the taxon name.

Standard Unit

Attribute

Name

samplingeffort

Label

Sampling effort

Definition

The amount of effort expended during an event.

Standard Unit

Attribute

Name

parameter

Label

Parameter name

Definition

The name of the parameter.

Standard Unit

Attribute

Name

parameter_value

Label

Parameter value

Definition

The value of the parameter.

Standard Unit

Attribute

Name

parameter_standardunit

Label

Parameter standard unit

Definition

The standard unit of the parameter.

Standard Unit
 
 






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