LifeWatch ERIC Metadata Catalogue
ARMS OTU Unifier
This service aims at creating an OTU table with species information that can be processed by WoRMS and WRIMS (steps 7 and 8).
It represents the Step 6 of the ARMS Workflow within the Internal Joint Initiative.
Default
Identification
- Date ( Publication )
- 2021-03-29
- Date ( Creation )
- 2019-07-04
- Status
- Under development / Pre operational
- Version
- 1.0
- Keywords
- OTU
- Keywords
- Operational Taxonomic Unit
- Keywords
- ARMS
- Keywords
- IJI
- Access constraints
- License
- Use limitation
- The final license will be available soon.
- Protocol
- DOI
- Operation name
- Final_table.tsv
- Description
- It is a CSV file with a the number of columns that depends on the number of sequences/samples that are processed in the PEMA run.
- Function
- Input file
- Operation name
- all_sequences_grouped.fasta
- Description
- It is a fasta file produced when PEMA is run on COI sequences.
- Function
- Input file
- Operation name
- Unified_species.csv
- Function
- Output file
- Service Category
- data processing
- Service Language
- eng
- Service TRL
- TRL 7 – System prototype demonstration in operational environment
