ARMS OTU Unify
This service aims at creating an OTU table with species information that can be processed by WoRMS and WRIMS.
It is part of the ARMS workflow of the Internal Joint Initiative available here: <a href=" https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/edf6017e-dc2f-4eec-8248-5a6c5de381b6" target="_blank"> https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/edf6017e-dc2f-4eec-8248-5a6c5de381b6</a>.
Default
- Date ( Publication)
- 2023-07-11
- Status
- Completed
- Keywords
-
taxonomy
- Keywords
-
metagenomics
- Keywords
-
remote sensing
- Keywords
-
OTU
- Keywords
-
Operational Taxonomic Unit
- Keywords
-
ARMS
- Keywords
-
IJI
- Access constraints
- License
- Use limitation
-
GPLv3
- Other constraints
-
Open Access
Distribution Information
- OnLine resource
-
Link to the service
(
WWW:LINK-1.0-http--link
)
- OnLine resource
-
Link to the workflow
(
WWW:LINK-1.0-http--link
)
- Operation name
-
Final_table.tsv
- Description
-
It is a CSV file with a the number of columns that depends on the number of sequences/samples that are processed in the PEMA run.
- Function
-
Input file
- Operation name
-
Unified_species.csv
- Function
-
Output file
- Related Services
-
Workflow Studio
- Service Category
-
data processing
- Service Language
- eng
- Service TRL
- TRL 7 – System prototype demonstration in operational environment
Metadata
- File identifier
- a4ff4000-dcb2-41a7-9c61-7bff4ae20507 XML
- Metadata language
- en
- Hierarchy level
- Service
- Metadata Schema Version
-
1.0
