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Traits Computation

The Traits Computation web service provides a user-friendly Graphical User Interface (GUI) that allow researchers to run a workflow wrapped into R code for the computation of morphological and demographic traits, such as biovolume, surface area, surface-volume ratio, density, cell carbon content, density, carbon content and total biovolume.

The service works on datasets structured according to the Phytoplankton Data Template that can be selected by the GUI or uploaded by the researchers. The input file is in CSV format with some mandatory fields according to the calculation type. Before selecting or uploading the input file, users have to specify some parameters (e.g., the calculation type, and the traits to be computed).

The web service provides as output a file in .csv format, including all input data and the new calculated traits.

Default

Date ( Publication)
2021-05-06
Status
On going / operational
Creator
  Italian Agency for the Environmental Prevention and Protection · Centro Regionale Mare (CRM)- Bari - Elena Stanca

Creator
  Institute of Research on Terrestrial Ecosystems (IRET), National Research Council (CNR) - Francesco Cozzoli

Creator
  LifeWatch ERIC Service Centre - Lucia Vaira

Creator
  LifeWatch ERIC Service Centre - Maria Teresa Manca

Creator
  Institute of Research on Terrestrial Ecosystems (IRET), National Research Council (CNR) - Jessica Titocci

Creator
  Institute of Research on Terrestrial Ecosystems (IRET), National Research Council (CNR) - Ilaria Rosati

Principal investigator
  University of Salento, LifeWatch Italy - Alberto Basset

Keywords

functional traits

Keywords

phytoplankton

Keywords

morphological traits

Keywords

biovolume

Keywords

surface area

Keywords

surface-volume ratio

Keywords

cell carbon content

Keywords

density

Keywords

carbon content

Keywords

R code

Access constraints
License
Other constraints

Fully Open Access

Use limitation

https://creativecommons.org/licenses/by/4.0/

OnLine resource
Link to the service (

WWW:LINK-1.0-http--link

)
OnLine resource
Phytoplankton Data Template (

WWW:LINK-1.0-http--link

)
Service Category

data analysis

Service Category

data processing

Service Language
eng
Service TRL
TRL 7 – System prototype demonstration in operational environment
Service Helpdesk

https://helpdesk.lifewatchitaly.eu/

Metadata

File identifier
ae7bc525-6358-4568-b8d1-b72686b3d575 XML
Metadata language
en
Hierarchy level
Service
Metadata Schema Version

1.1

 
 

Overviews

overview
traits computation.jpg
overview

Spatial extent

Keywords



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This service is powered by LifeWatch ERIC

The GeoNetwork open source software is released under the GPL v2 license and has been customised in plugins and functionalities by LifeWatch ERIC