Input For_modeling_df_shallow_carbon_density.rds file for Seagrass carbon stock model

This is an input file for the Seagrass carbon stock input from GUI workflow component available at https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/b1b247f4-62fc-478b-8e43-ba887fddfa88.

IdentificationAbout this resource

Alternate Identifier: aeef9d05-2bf9-40a2-aa63-6fbe182f58af

Publication Date: 2025-11-14

Title: Input For_modeling_df_shallow_carbon_density.rds file for Seagrass carbon stock model

Short Name

Abstract: This is an input file for the Seagrass carbon stock input from GUI workflow component available at https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/b1b247f4-62fc-478b-8e43-ba887fddfa88.

Dataset Language: en

Dataset Creator: NORCE - Natalya Gallo (Postdoctoral researcher)

Metadata Provider: LifeWatch ERIC - Quan Pan (RD Engineer for Cloud-based Virtual Research Environment)

Dataset Contact: NORCE - Natalya Gallo (Postdoctoral researcher)

Keywords (None)

global ocean physics reanalysis
global ocean biogeochemistry hindcast
global ocean waves reanalysis
global ocean sea surface height
global ocean sea surface temperature
surface ocean carbon fields

resourceLicensesLicense Information

Intellectual Rights: Apache License, Version 2.0

Distribution

Online

A brief description of the the content of online URL.: Input For_modeling_df_shallow_carbon_density.rds file for Seagrass carbon stock model

URL: https://beta.naavre.net/jupyter/hub/user-redirect/lab/tree/Cloud%20Storage/naa-vre-public/vl-bluecarbon/For_modeling_df_shallow_carbon_density.rds

• Project

Title: Marine Coastal Biodiversity Long-term Observations (MARCO-BOLO): Strengthening biodiversity observation in support of decision making

Abstract: MARCO-BOLO (MBO) aims to structure and strengthen European coastal and marine biodiversity observation capabilities, linking them to global efforts to understand and restore ocean health, hence ensuring that outputs respond to explicit stakeholder needs from policy, planning and industry. To this end MBO will establish and engage with a Community of Practice (CoP) to determine end-user needs with the aim of optimising marine data flows, knowledge uptake, and improving governance based on biodiversity observations. By exploiting synergies with concurrent projects MBO will develop and demonstrate new autonomous technology for biodiversity mapping and monitoring, and data streams from remote sensing, eDNA, robotics, optical and acoustic observations. Protocols for eDNA-based biodiversity observations are established and validated across applications, taxa and ecosystems. The sequence of the analytical and technical processes for the different use cases will be incorporated into operational Essential Ocean Variables (EOVs) and Essential Biodiversity Variables (EBVs) and included into online reusable workflows, contributing to the free and open access of EU and global biodiversity information facilities, and to support major EU biodiversity directives and global initiatives. The project partnership will leverage its international activities (MBON, GOOS, OBIS) and participation in UN Ocean Decade Programmes (Marine Life 2030, OBON, ODIS, Ocean Practices for the Decade) to align the MBO work programme to global CoP, ensuring European participation and leadership in global biodiversity monitoring and global science. MBO results will be designed to build upon existing capability and infrastructures, and to be relevant to existing frameworks so that outputs can be easily integrated into national, regional (EU and adjacent sea basins), and global observation systems, with no delay ensuring the reusability of the investments Europe is already making in data generation.

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• Data Table

Name: For_modeling_df_shallow_carbon_density.rds

Physical

Data Format

Externally Defined Format

Format Name: R Data Serialization

Attribute List

Attribute

Name: bottomT

Label: Sea water potential temperature at sea floor bottom

Definition: The temperature a parcel of water at the very bottom of the ocean would have if it were raised adiabatically (without exchanging heat) to the sea surface. It corrects for the warming effect of extreme water pressure at great depths.

Standard Unit: celsius

Attribute

Name: uo

Label: Eastward seawater velocity

Definition: The horizontal speed of water moving toward the east, with negative values indicating westward motion.

Standard Unit: meterPerSecond

Attribute

Name: vo

Label: Northward seawater velocity

Definition: The meridional component of the horizontal ocean current vector, representing the speed at which seawater is flowing directly to the north.

Standard Unit: metersPerSecond

Attribute

Name: so

Label: Salinity

Definition: The concentration of dissolved salts (primarily sodium and chloride) in seawater, usually expressed in parts per thousand (ppt) or Practical Salinity Units (PSU).

Standard Unit

Attribute

Name: deptho

Label: Bathymetry

Definition: The depth and topography of underwater surfaces.

Standard Unit: meter

Attribute

Name: o2

Label: Dissolved oxygen concentration

Definition: The amount of free oxygen gas that is physically dissolved between water molecules.

Standard Unit: millimolePerMeterCubed

Attribute

Name: phyc

Label: Total phytoplankton

Definition: The total concentration of phytoplankton biomass in a water body, expressed in terms of the amount of carbon or nitrogen bound within the living algal cells per unit of volume.

Standard Unit: millimolePerMeterCubed

Attribute

Name: fe

Label: Dissolved iron

Definition: The amount of iron substance.

Standard Unit: millimolePerMeterCubed

Attribute

Name: no3

Label: Nitrate

Definition: The amount of nitrate.

Standard Unit: millimolePerMeterCubed

Attribute

Name: po4

Label: Phosphate

Definition: The chemical compound containing phosphorus and oxygen, measured to study water quality and marine life.

Standard Unit: millimolePerMeterCubed

Attribute

Name: nppv

Label: Total primary production of phytoplankton

Definition: The rate at which microscopic marine algae convert inorganic carbon into organic matter via photosynthesis.

Standard Unit: milligramPerMeterCubedPerDay

Attribute

Name: ph

Label: pH

Definition: The numeric value of the pH.

Standard Unit

Attribute

Name: spco2

Label: Surface CO2

Definition: The partial pressure of carbon dioxide pCO2 in the ocean's top layer and the air above it.

Standard Unit: pascal

Attribute

Name: VHM0

Label: Sea surface wave significant height

Definition: The height of ocean waves in a given sea state. It is defined as the average height (trough to crest) of the highest one-third (33%) of all waves over a specific time period.

Standard Unit: meter

Attribute

Name: eke

Label: Specific kinetic energy of sea water eke

Definition: It measures the intensity of swirling, time-variable currents (mesoscale eddies) relative to the time-averaged circulation.

Standard Unit: centimeter

Attribute

Name: analysed_sst

Label: Foundation sea surface temperature

Definition: The temperature free of diurnal variability.

Standard Unit: kelvin

Attribute

Name: VAVH_DAILY_MAX

Label: Daily maximum significant wave height

Definition: The highest recorded average of the tallest one-third of waves within a 24-hour period.

Standard Unit: meter

Attribute

Name: VAVH_DAILY_MEAN

Label: Daily mean significant wave height

Definition: The average height of the highest one-third of all ocean waves over a 24-hour period.

Standard Unit: meter

Attribute

Name: VAVH_DAILY_STD

Label: Daily standard deviation of significant wave height

Definition: It measures the day-to-day variability of ocean waves.

Standard Unit: meter

Attribute

Name: VAVH_DAILY_NBR

Label: Daily number of significant wave height measurements

Definition: It counts the total number of valid satellite, buoy, and in-situ observations used to compile daily sea state statistics on a given grid.

Standard Unit

Attribute

Name: talk

Label: Total alkalinity in surface seawater

Definition: A measure of the water's capacity to neutralise acids, representing the concentration of buffering molecules like carbonate and bicarbonate.

Standard Unit: micromolePerKilogram

Attribute

Name: spco2

Label: Surface aqueous partial pressure of CO2

Definition: A measurement of the amount of carbon dioxide dissolved in seawater, expressed as the pressure the gas would exert if it were in a hypothetical air volume in equilibrium with the water.

Standard Unit: atmosphere

Attribute

Name: fgco2

Label: Surface downward flux of total CO2

Definition: It measures the net amount of carbon dioxide passing from the atmosphere down into the Earth’s surface (land or oceans). It quantifies the rate at which carbon is absorbed or sequestered by ecosystems and oceans, often expressed in grams of carbon per square meter or petagrams globally per year.

Standard Unit: molality

Input For_modeling_df_shallow_carbon_density.rds file for Seagrass carbon stock model

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IdentificationAbout this resource

resourceLicensesLicense Information

Distribution

Online

Project

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