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all_sequences_grouped.fasta_output.csv

It is the output file of the optional step 5.3 "Bold Retriever" and the input file of "ARMS OTU Unifier" (step 6) of the ARMS workflow of the Internal Joint Initiative.

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Default

Identification

Alternate Identifier

b5f11ef0-d16c-40a5-a464-7c304896550e

Publication Date
2021-12-07
Title

all_sequences_grouped.fasta_output.csv

Abstract

It is the output file of the optional step 5.3 "Bold Retriever" and the input file of "ARMS OTU Unifier" (step 6) of the ARMS workflow of the Internal Joint Initiative.

 
Dataset Creator
  Hellenic Centre for Marine Research - Christina Pavloudi (Scientist)

https://orcid.org/0000-0001-5106-6067
Metadata Provider
  Flanders Marine Institute (VLIZ) - Katrina Exter (Data Manager)

https://orcid.org/0000-0002-5911-1536
Dataset Contact
  Hellenic Centre for Marine Research - Christina Pavloudi (Scientist)

Keywords ()
  • DNA

  • OTU

  • Bold

  • taxonomy classification

  • ARMS

  • IJI

Taxonomic Coverage

No information provided.

License Information

Intellectual Rights
 
 
 

Data Tables

• Data Table

Name

all_sequences_grouped.fasta_output

Physical

Data Format

Externally Defined Format

Format Name

CSV

Attribute List

Attribute

Name

ID

Label
Definition

Attribute

Name

OtuID

Label
Definition

Attribute

Name

BIN

Label
Definition

Attribute

Name

tax_id

Label
Definition

Attribute

Name

sequencedescription

Label
Definition

Attribute

Name

database

Label
Definition

Attribute

Name

citation

Label
Definition

Attribute

Name

taxonomicidentification

Label
Definition

Attribute

Name

similarity

Label
Definition

Attribute

Name

url

Label
Definition

Attribute

Name

country

Label
Definition

Attribute

Name

lat

Label
Definition

Attribute

Name

lon

Label
Definition

Attribute

Name

phylum

Label
Definition

Attribute

Name

class

Label
Definition

Attribute

Name

order

Label
Definition

Attribute

Name

family

Label
Definition

Attribute

Name

subfamily

Label
Definition

Attribute

Name

tribe

Label
Definition