biomod2 R package - Ensemble Platform for Species Distribution Modeling

Algorithms for presence-only (SRE), presence-background (Maxent) and presence-absence (GAM, GLM, BRT, ANN). The package includes a set of functions for species distribution modeling, calibration and evaluation, ensemble of models, ensemble forecasting and visualisation. The package permits to run consistently up to 10 single models on a presence/absences (resp presences/pseudo-absences) dataset and to combine them in ensemble models and ensemble projections. Some bench of other evaluation and visualisation tools are also available within the package.

Date ( Publication): 2023-06-16

Status: Completed

Author

Laboratoire d'Ecologie Alpine, UMR CNRS 5553, Univ. Joseph Fourier, Grenoble Cedex 9, France - Wilfried Thuiller

Creator

- Damien Georges

Creator

Creator

Creator

- Frank Breiner

Creator

Keywords: modelling

Keywords: SDM

Keywords: species distribution modelling

Keywords: model ensemble

Keywords: presence-absence

Keywords: model evaluation

Keywords: R

Access constraints: License

Use limitation: https://cran.r-project.org/web/licenses/GPL-3

OnLine resource: CRAN link (
WWW:LINK-1.0-http--link
)

Topic Category: Species distribution

Service Category: data collection and preparation

Service Category: model computation

Service Category: data processing

Service Category: modelling

Service Language: eng

Service TRL: TRL 9 – Actual system proven in operational environment

Service Training: https://onlinelibrary.wiley.com/doi/10.1111/j.1600-0587.2008.05742.x

Service User Manual: https://cran.r-project.org/web/packages/biomod2/biomod2.pdf

Metadata

File identifier: bcfc2f36-d67e-4e0d-9fe1-979c9b78f9a9 XML

Metadata language: en

Hierarchy level: Service

Metadata Schema Version: 4.2.4

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