Template output csv file for Species occurrence data cleaner - data
This is an example of the output metadata file of the <a href=" https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/258e222b-5945-4efd-8292-b4dea4b1308c" target="_blank">Species occurrence data cleaner</a> in the <a href=" https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/52472525-ddf7-4521-abc9-f4b8a98b82ae" target="_blank">Biodiversity Time Series Analyses from European Marine Ecosystems workflow</a>. The columns of the CSV are a superset of the columns of the output of the <a href=" https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/d9fc8450-10d0-4774-92af-257a1fc4e488" target="_blank">Biodiversity data from excel retriever</a>, with additional columns 'month' and 'year' derived from metadata.
Default
IdentificationAbout this resource
- Alternate Identifier
-
d372f6a3-4533-4a86-9afc-77e7e2e5b04c
- Publication Date
- 2025-11-05
- Title
-
Template output csv file for Species occurrence data cleaner - data
- Short Name
- Abstract
-
This is an example of the output metadata file of the <a href=" https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/258e222b-5945-4efd-8292-b4dea4b1308c" target="_blank">Species occurrence data cleaner</a> in the <a href=" https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/52472525-ddf7-4521-abc9-f4b8a98b82ae" target="_blank">Biodiversity Time Series Analyses from European Marine Ecosystems workflow</a>. The columns of the CSV are a superset of the columns of the output of the <a href=" https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/d9fc8450-10d0-4774-92af-257a1fc4e488" target="_blank">Biodiversity data from excel retriever</a>, with additional columns 'month' and 'year' derived from metadata.
- Dataset Language
-
en
- Dataset Creator
- Metadata Provider
- Dataset Contact
- Keywords (None)
-
-
data preprocessing
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CSV
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Marco-Bolo
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resourceLicensesLicense Information
- Intellectual Rights
-
MIT License
Distribution
Online
- A brief description of the the content of online URL.
-
Sample csv file
Project
• Project
- Title
-
Marine Coastal Biodiversity Long-term Observations (MARCO-BOLO): Strengthening biodiversity observation in support of decision making
- Abstract
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MARCO-BOLO (MBO) aims to structure and strengthen European coastal and marine biodiversity observation capabilities, linking them to global efforts to understand and restore ocean health, hence ensuring that outputs respond to explicit stakeholder needs from policy, planning and industry. To this end MBO will establish and engage with a Community of Practice (CoP) to determine end-user needs with the aim of optimising marine data flows, knowledge uptake, and improving governance based on biodiversity observations. By exploiting synergies with concurrent projects MBO will develop and demonstrate new autonomous technology for biodiversity mapping and monitoring, and data streams from remote sensing, eDNA, robotics, optical and acoustic observations. Protocols for eDNA-based biodiversity observations are established and validated across applications, taxa and ecosystems. The sequence of the analytical and technical processes for the different use cases will be incorporated into operational Essential Ocean Variables (EOVs) and Essential Biodiversity Variables (EBVs) and included into online reusable workflows, contributing to the free and open access of EU and global biodiversity information facilities, and to support major EU biodiversity directives and global initiatives. The project partnership will leverage its international activities (MBON, GOOS, OBIS) and participation in UN Ocean Decade Programmes (Marine Life 2030, OBON, ODIS, Ocean Practices for the Decade) to align the MBO work programme to global CoP, ensuring European participation and leadership in global biodiversity monitoring and global science. MBO results will be designed to build upon existing capability and infrastructures, and to be relevant to existing frameworks so that outputs can be easily integrated into national, regional (EU and adjacent sea basins), and global observation systems, with no delay ensuring the reusability of the investments Europe is already making in data generation.
Personnel
- Organization Name
Individual Name
- Given Name
- Surname
- Position Name
Data Tables
• Data Table
- Name
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Data_example
Physical
Data Format
Externally Defined Format
- Format Name
-
csv
Attribute List
Attribute
- Name
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X
- Label
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Row number in the metadata before filtering
- Definition
-
<span class="text-muted ng-binding" data-ng-bind-html="b.attributeDefinition">The row number in the pre-filtered metadata set where the metadata originates from.</span>
- Standard Unit
Attribute
- Name
-
datecollected
- Label
-
Date of collection
- Definition
-
The date in which the sample has been collected.
- Standard Unit
Attribute
- Name
-
siteid
- Label
-
Site identifier
- Definition
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The site-specific (e.g. alpha-numeric) identifier for each sampling location.
- Standard Unit
Attribute
- Name
-
sampleid
- Label
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Sample ID
- Definition
-
The identifier of the collected sample.
- Standard Unit
Attribute
- Name
-
basisofrecord
- Label
-
Basis of record
- Definition
-
The specific nature of the data record.
- Standard Unit
Attribute
- Name
-
minimumdepthinmeters
- Label
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Minimum depth in meters
- Definition
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The lesser depth of a range of depth below the local surface, in meters.
- Standard Unit
Attribute
- Name
-
maximumdepthinmeters
- Label
-
Maximum depth in meters
- Definition
-
The greater depth of a range of depth below the local surface, in meters.
- Standard Unit
Attribute
- Name
-
taxaname
- Label
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Taxon name
- Definition
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The formal scientific name assigned to a taxon.
- Standard Unit
Attribute
- Name
-
taxanameid
- Label
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Taxon name id
- Definition
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The identifier for the taxon name.
- Standard Unit
Attribute
- Name
-
samplingeffort
- Label
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Sampling effort
- Definition
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The amount of effort expended during an event.
- Standard Unit
Attribute
- Name
-
parameter
- Label
-
Parameter name
- Definition
-
The name of the parameter.
- Standard Unit
Attribute
- Name
-
parameter_value
- Label
-
Parameter value
- Definition
-
The value of the parameter.
- Standard Unit
Attribute
- Name
-
parameter_standardunit
- Label
-
Parameter standard unit
- Definition
-
The standard unit of the parameter.
- Standard Unit
Attribute
- Name
-
month
- Label
-
Month
- Definition
-
The sampling month.
- Standard Unit
Attribute
- Name
-
year
- Label
-
Year
- Definition
-
The sampling year.
- Standard Unit
