Global database of alien macrofungi
This dataset contains comprehensive information about the global alien spread and distribution of macrofungi species during the last centuries (1753-2018)
Default
Identification
- Alternate Identifier
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da3542b4-9a73-4054-b9a3-2d762e172199
- Publication Date
- 2020-02-18
- Title
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Global database of alien macrofungi
- Abstract
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This dataset contains comprehensive information about the global alien spread and distribution of macrofungi species during the last centuries (1753-2018)
- Dataset Language
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ENGLISH
- Dataset Creator
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CIBIO/INBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos,Universidade do Porto - Miguel Monteiro (Phd Student)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Porto
,4485‑661
,PORTUGAL
- Dataset Creator
-
CIBIO/InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto - Luís Reino (Research Fellow)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Porto
,4485‑661
,PORTUGAL
- Dataset Creator
- Dataset Creator
- Dataset Creator
-
Centro de Estudos Florestais, Instituto Superior de Agronomia, Universidade de Lisboa - Maria Teresa Ferreira (Professor)
Tapada da Ajuda
,Lisboa
,1349-017
,PORTUGAL
- Dataset Creator
-
LEAF-Linking Landscape, Environment, Agriculture and Food, Instituto Superior de Agronomia, Universidade de Lisboa - Rui Figueira (GBIF Node Manager for Portugal)
Tapada da Ajuda
,Lisboa
,1349-017
,PORTUGAL
- Dataset Creator
-
Centro de Estudos Geográficos, Instituto de Geografia e Ordenamento do Território - IGOT, Universidade de Lisboa - César Capinha (Research Fellow)
Rua Branca Edmée Marques
,Lisboa
,1600-276
,PORTUGAL
- Metadata Provider
-
CIBIO/InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade de Lisboa - Miguel Monteiro (Phd student)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Porto
,4485‑661
,PORTUGAL
- Metadata Provider
-
CIBIO/InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade de Lisboa - Luís Reino (Research Fellow)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Porto
,4485‑661
,PORTUGAL
- Metadata Provider
- Metadata Provider
- Metadata Provider
-
Centro de Estudos Florestais, Instituto Superior de Agronomia, Universidade de Lisboa - Maria Teresa Ferreira (Professor)
Tapada da Ajuda
,Lisboa
,1349-017
,PORTUGAL
- Metadata Provider
-
LEAF-Linking Landscape, Environment, Agriculture and Food, Instituto Superior de Agronomia, Universidade de Lisboa - Rui Figueira (GBIF Node Manager for Portugal)
Tapada da Ajuda
,Lisboa
,1349-017
,PORTUGAL
- Metadata Provider
-
Centro de Estudos Geográficos, Instituto de Geografia e Ordenamento do Território - IGOT, Universidade de Lisboa - César Capinha (Research Fellow)
Rua Branca Edmée Marques
,Lisboa
,1600-276
,PORTUGAL
- Associated Party
-
USER
CIBIO/InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade de Lisboa - Miguel Monteiro (Phd Student)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Porto
,4485‑661
,PORTUGAL
- Dataset Contact
-
CIBIO/InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade de Lisboa ,University of Porto - Miguel Monteiro (Phd Student)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Porto
,4485‑661
,PORTUGAL
- Keywords (Alien macrofungi occurences)
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Introduced species
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fungal biogeography
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biological invasions
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species occurrence data
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- Keywords (GBIF Dataset Type Vocabulary: http://rs.gbif.org/vocabulary/gbif/dataset_type.xml)
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Checklist
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- Keywords (GBIF Dataset Subtype Vocabulary: http://rs.gbif.org/vocabulary/gbif/dataset_subtype.xml)
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Globalspeciesdataset
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Geographic Coverage
- Geographic Description
-
Countries and the first-order administrative divisions of the six largest countries in the world (Australia, Brazil, Canada, China, Russia and United States). Antarctica is not included
Bounding Box
- West Bounding Coordinate
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-180
- East Bounding Coordinate
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180
- North Bounding Coordinate
-
90
- South Bounding Coordinate
-
-90
Temporal Coverage
Range of Dates
- Begin Date
- End Date
Taxonomic Coverage
- General Taxonomic Coverage
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All macromycetes were identified to species level. There are also some inclusions of records reporting varieties, forms or subspecies. All mispellings have been corrected. Nomenclatural updates are maintained based on the indexfungorum database ( http://www.indexfungorum.org) and mycobank ( http://www.mycobank.org).
Taxonomic Classification
- Taxonomic Rank Name
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Kingdom
- Taxonomic Rank Value
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Fungi
Taxonomic Classification
- Taxonomic Rank Name
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Phylum
- Taxonomic Rank Value
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Ascomycota
Taxonomic Classification
- Taxonomic Rank Name
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Phylum
- Taxonomic Rank Value
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Basidomycota
Taxonomic Classification
- Taxonomic Rank Name
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Class
- Taxonomic Rank Value
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Agarocomycetes
Taxonomic Classification
- Taxonomic Rank Name
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Class
- Taxonomic Rank Value
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Dacrymycetes
Taxonomic Classification
- Taxonomic Rank Name
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Class
- Taxonomic Rank Value
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Dothideomycetes
Taxonomic Classification
- Taxonomic Rank Name
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Class
- Taxonomic Rank Value
-
Pezizomycetes
Taxonomic Classification
- Taxonomic Rank Name
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Class
- Taxonomic Rank Value
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Sordariomycetes
Taxonomic Classification
- Taxonomic Rank Name
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Class
- Taxonomic Rank Value
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Tremellomycetes
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Agaricales
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Amylocorticiales
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Auriculariales
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
-
Boletales
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
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Cantharellales
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Dacrymycetales
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Diaporthales
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Geastrales
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
-
Gloeophyllales
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
-
Gomphales
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
-
Helotiales
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
-
Hymenochaetales
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
-
Hypocreales
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Hysterangiales
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
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Pezizales
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Phallales
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Pleosporales
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Polyporales
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Russulales
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Thelephorales
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Xylariales
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Agaricaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Albatrellaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Amanitaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Amylostereaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Auriculariaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Bankeraceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Bolbitiaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Boletaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Bondarzewiaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Cantharellaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Clavariaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Clavulinaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Coniophoraceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Cortinariaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Cucurbitariaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Cyphellaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Dacrymycetaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Diaporthaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Diplocystidiaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Discinaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Entolomataceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Fomitopsidaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Ganodermataceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Gastrosporiaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Geastraceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Gelatinodiscaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Gloeophyllaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Gomphaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Gomphidiaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Gyroporaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Helotiaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Helvellaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Hydnaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Hydnangiaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Hygrophoraceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Hymenochaetaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Hymenogastraceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Hypoxylaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Hysterangiaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Inocybaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Lachnaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Marasmiaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Meripilaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Meruliaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Mesophelliaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Morchellaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Mycenaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Nectriaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Omphalotaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Paxillaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Pezizaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
-
Phallaceae
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
-
Phallogastraceae
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
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Phelloriniaceae
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
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Physalacriaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Pleurotaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
-
Pluteaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Polyporaceae
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
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Psathyrellaceae
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
-
Pyronemataceae
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
-
Repetobasidiaceae
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
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Russulaceae
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
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Rutstroemiaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Sarcoscyphaceae
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
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Schizophyllaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Schizoporaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Sclerodermataceae
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
-
Sclerotiniaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Serpulaceae
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
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Sparassidaceae
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
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Stereaceae
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
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Strophariaceae
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
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Suillaceae
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
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Thelephoraceae
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
-
Tremellaceae
Taxonomic Classification
- Taxonomic Rank Name
-
Order
- Taxonomic Rank Value
-
Tricholomataceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Tubariaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Tuberaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Typhulaceae
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Xylariaceae
License Information
- Intellectual Rights
-
This work is licensed under a
Creative Commons Attribution (CC-BY) 4.0 License
.
Additional Metadata
Metadata
GBIF Metadata Block
- Date Stamp
-
2021-11-29T09:09:00Z
- Citation
-
Monteiro M, Reino L, Schertler A, Essl F, Ferreira M T, Figueira R, Capinha C (2020). Global database of alien macrofungi. Version 1.4. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Checklist dataset https://doi.org/10.15468/2qky1q accessed via GBIF.org on 2021-11-29.
- Bibliography
-
Desprez-Loustau ML (2009) The alien fungi of Europe. In: Hulme, Philip E., (eds.) Handbook of Alien Species in Europe. Springer, Dordrecht, 15–28.
Essl F, Bacher S, Genovesi P, Hulme, PE, Jeschke JM, Katsanevakis S, Kowarik I, Kuhn I, Pysek P, Rabitsch W, Schindler S, van Kleunen M, Vilà M, Wilson JRU and Richardson DM (2018). Which taxa are alien? Criteria, applications, and uncertainties. BioScience, 68: 496-509. https://doi.org/10.1093/biosci/biy057
European Commission (2019) European Alien Species Information Network- EASIN. https://easin.jrc.ec.europa.eu/easin [Accessed on: 18/09/2017]
Hulme PE, Nentwig, W, Pyšek, P, and Vilà, M (2019). DAISIE: Delivering Alien Invasive Species Inventories for Europe. http://www.europe-aliens.org/ [Acessed: 20 September 2017]
Index Fungorum (2019). CABI Database. http://www. indexfungorum. org [Acessed: 20 January 2019].
IUCN (2019) Global Invasive Species Database GISD. Invasive Species Specialist Group ISSG. http://www.iucngisd.org/gisd/ [Accessed on: 20/09/2017]
Katsanevakis S, Deriu I, D’Amico F, Nunes AL, Sanchez SP, Crocetta F, Arianoutsou M, Bazos I, Christopoulou A, Curto G, Delipetrou P, Kokkoris Y, Panov V, Rabitsch W, Roques A, Scalera R, Shirley SM, Tricarino E, Vannini A, Zenetos A, Zervou S, Zikos A, Cardoso AC (2015) European Alien Species Information Network (EASIN): supporting European policies and scientific research. https://easin.jrc.ec.europa.eu/easin [Acessed: 18 September 2017]
iNaturalist (2019) iNaturalist research‐grade observations. https://www.inaturalist.org/ [Acessed: 18 January 2018]
Troudet J, Grandcolas P, Blin, A, Vignes-Lebbe, R, and Legendre F (2017). Taxonomic bias in biodiversity data and societal preferences. Scientific Reports, 7: 9132. https://doi.org/10.1038/s41598-017-09084-6
Vellinga EC, Wolfe BE, and Pringle A (2009) Global patterns of ectomycorrhizal introductions. New Phytologist, 181: 960-973. https://doi.org/ 10.1111/j.1469-8137.2008.02728.x
Vizzini A, Zotti M, and Mello A (2009) Alien fungal species distribution: the study case of Favolaschia calocera. Biological invasions, 11: 417-429. https://doi.org/10.1007/s10530-008-9259-5
Wilson N, and Hollinger J (2019) Mushroom observer https://mushroomobserver.org/ [Accessed on: 18 December 2017]
CABI (2019) Invasive Species Compendium. Wallingford, UK: CAB International. https://www.cabi.org/ [Accessed on: 10 October 2018]
Project
• Project
- Title
-
A database of the global distribution of alien macrofungi
Personnel
Individual Name
- Given Name
-
Miguel
- Surname
-
Monteiro
- User ID
-
0000-0002-2804-4166
- Role
-
AUTHOR
Personnel
Individual Name
- Given Name
-
Luís
- Surname
-
Reino
- Role
-
AUTHOR
Personnel
Individual Name
- Given Name
-
Anna
- Surname
-
Schertler
- Role
-
AUTHOR
Personnel
Individual Name
- Given Name
-
Franz
- Surname
-
Essl
- Role
-
AUTHOR
Personnel
Individual Name
- Given Name
-
Maria Teresa
- Surname
-
Ferreira
- Role
-
AUTHOR
Personnel
Individual Name
- Given Name
-
Rui
- Surname
-
Figueira
- Role
-
AUTHOR
Personnel
Individual Name
- Given Name
-
César
- Surname
-
Capinha
- Role
-
AUTHOR
- Abstract
-
In this publication we present the recently completed Global Alien Macrofungi Database, a database of distribution records of alien macrofungi aggregated from all relevant sources we could identify, namely publications, reports, databases on invasive alien species and citizen science observations. In total, the dataset contains occurrences for nearly 650 alien species, registered in more than 140 countries and sub-national administrative divisions. This represents an increase of nearly 2.5 times the number of alien records and 3.2 times the number of alien species found in the most comprehensive distribution database for alien ectomycorrhizal fungi available prior to our work (Velinga et al., 2009). The presented database is expected to provide a valuable contribution towards the increasing understanding of the spatial and temporal dynamics of biological invasions worldwide.
- Funding
-
This work was funded by the FEDER Funds through the Operational Competitiveness Factors Program - COMPETE and by National Funds through FCT, I.P. - Foundation for Science and Technology within the scope of the project “PTDC/BIA-EVL/30931/2017- POCI-01-0145-FEDER-030931” Miguel Monteiro was funded by an PhD fellowship SFRH/BD/119170/2016. César Capinha and Luís Reino were funded by National Funds through FCT, I.P., under the programme of ‘Stimulus of Scientific Employment – Individual Support’ within contracts 'CEECIND/02037/2017' and ‘CEECIND/00445/2017’ respectively. Franz Essl and Anna Schertler received funding by the Austrian Science Foundation FWF (grant 3757-B29).
Study Area Description
- Descriptor
-
Countries and the first-order administrative divisions of the six largest countries in the world (Australia, Brazil, Canada, China, Russia and United States).
Design Description
- Description
-
The creation of the “Global Alien Macrofungi Database” followed a two-step approach. In the first step, we performed an exhaustive search for data sources supplying occurrence records of macrofungi. In the second step, we harmonized the collected data and entered it into a standardized database.
Our search and collation of alien macrofungi records was carried out during the years 2017-2019. For the first step, we analysed the database made available by Vellinga et al. (2009), who collected a total of 770 distribution records of ectomycorrhizal fungi from more than 190 publications. However, given the exclusive focus of the database on ectomycorrhizal fungi and consequential absence of data on saprotroph species, it can hardly be assumed that the patterns represented in Vellinga at el. (2009) provide a precise portrayal of the global biogeography of alien macrofungi. Hence, we built up on their database and additionally performed a complementary search for alien saprotroph fungi as well as any new records of alien ectomycorrizhal fungi.
For the second step, all collected records were entered into two different data sets. First, we compiled a taxonomic checklist that accounts for all macrofungi taxa we found to be introduced outside their native range. Secondly, we described the according alien occurrences of those taxa including additional important data, such asdates of introduction, host information and occurrence remarks related to the population status in the invaded regions. Here, each entry corresponded to a single record described as alien taxon in a specific location. If a taxon in a given locality was reported multiple times by different sources, we merged the information into a single database entry and cited the first reference in time reporting the record.
Data entry management and publication were carried out using the Darwin Core Archive format.
Methods
• Method
Method Step
- Description
-
The creation of the “Global Alien Macrofungi Database” followed a two-step approach. In the first step, we performed an exhaustive search for data sources supplying occurrence records of macrofungi. In the second step, we harmonized the collected data and entered it into a standardized database.
Our search and collation of alien macrofungi records was carried out during the years 2017-2019. For the first step, we analysed the database made available by Vellinga et al. (2009), who collected a total of 770 distribution records of ectomycorrhizal fungi from more than 190 publications. However, given the exclusive focus of the database on ectomycorrhizal fungi and consequential absence of data on saprotroph species, it can hardly be assumed that the patterns represented in Vellinga at el. (2009) provide a precise portrayal of the global biogeography of alien macrofungi. Hence, we built up on their database and additionally performed a complementary search for alien saprotroph fungi as well as any new records of alien ectomycorrizhal fungi.
For the second step, all collected records were entered into two different data sets. First, we compiled a taxonomic checklist that accounts for all macrofungi taxa we found to be introduced outside their native range. Secondly, we described the according alien occurrences of those taxa including additional important data, such as dates of introduction, host information and occurrence remarks related to the population status in the invaded regions. Here, each entry corresponded to a single record described as alien taxon in a specific location. If a taxon in a given locality was reported multiple times by different sources, we merged the information into a single database entry and cited the earliest reference in time reporting the record.
Data entry management and publication were carried out using the Darwin Core Archive format.
Sampling
- Study Extent
-
We built our database by compiling occurrences of introduced macrofungal species based on intensive searches in published and unpublished sources. Data was extracted from peer-reviewed articles, scientific and technical reports, books and book chapters, alien species databases and online citizen-science repositories. Finally, we also approached selected mycologists via email. These experts were contacted and asked if they were aware of records of alien macrofungi or of data resources other than the ones we identified through online searches.
- Sampling Description
-
The data collection process consisted of three different procedures, as it is explained below.
1)Identifying and obtaining relevant records from publications
During the search process, we initially looked up for records in broader introduced taxa databases such as the ones from Delivering Alien Invasive Species Inventories for Europe (Hulme et al. 2019), Global Register of Introduced and Invasive Species (Pagadad et al. 2019) and European Alien Species Information Network (European Commission 2019). In a next step we used general-purpose search engines (i.e., Google) and scientific search engines (Google Scholar, Science Direct and jstore.online) to gather more information from relevant literature. We entered key terms related to fungal invasion in different languages including English, German, French, Spanish and Portuguese. The terms used were ‘introduced´, ’invasive’, ‘established’, ‘alien’ and ‘exotic’, which were combined with fungal taxonomic terms ranging from a generic and higher denomination (e.g. ‘fungi’, ‘macromycetes’, ‘basidiomycota’) to a more specific designation such as the scientific name (e.g. Amanita muscaria (L.) Lam., Amanita phalloides Secr.) or a common name (e.g. Fly agaric, Death cap). For each combination, we repeated the searches by adding the name of one continent or country, until all continents and countries were being considered. As examples, final search terms would be like ‘European alien fungi ‘, ‘introduced basidomycota in United States’ or ‘introduced Amanita muscaria + South America’.
2)Cross-checking of alien status
For each record we assessed the reliability of the alien status given by the original data sources. Records collected from sources explicitly dealing with alien taxa (e.g., Vellinga et al., 2009), retained the nativity status given by the data. These statuses corresponded either to ‘alien’ or to ‘cryptogenic’ (sensu Essl et al., 2018). Records collected from non-specialized sources (e.g., species checklists not considering nativity, grey literature and citizen-science data) were cross-checked against biogeographical information available in the scientific literature or with mycologists. Cases where the records referred to regions outside known native ranges were coded as ‘alien’. Cases in clear biogeographical conflict with known native ranges were not considered for inclusion in our database. Finally, cases where the native or alien status was not possible to identify unambiguously were also not considered.
3)Occurrence data entry
To be included in our database records had to meet specific criteria regarding taxonomy and locality description. First, a record must describe a macrofungal species which, that means it should have sporocarps at least 2 mm in size irrespective of phylogenetic placement (Senn-Irlet 2007). As this was not always clear, we had to double-check our data with relevant fungal literature to be sure that the families or even the orders of the referred species were cited as part of the macroscopic fungi checklists. We also had to be certain that the records were identified at least to the species level, as a way of knowing that all contemplated species were in fact alien organisms in the non-native places. Furthermore, the records had to be accompanied by geospatial coordinates or, at minimum, an unambiguous textual designation of location level reference (e.g., region, country, and locality). Finally, the record had to represent a fungal species introduced by human activity on a non-native region because it is the easiest way to be sure that the species was not native. These tasks were accomplished by the main author Miguel Monteiro during the years 2017-2019 with the supervision of experts in fungal ecology and biogeography. These experts were also consulted and asked if they were aware of records of alien macrofungi or of data resources other than the ones we identified through online searches.
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For the development of the dataset the records from the original sources were revised by the first author because, some of the names of the species were not updated or sometimes misspelled. As a result, some changes at any of the taxonomic ranks (e.g. order, family, genus or species) had to be adopted in conformity with the used nomenclature. Even though, in cases of synonyms both names were included. The taxonomic revision of scientific names and data checking were performed by using Index Fungorum (Index Fungorum 2019) and Mycobank (Robert et al. 2019). To publish our dataset in the GBIF network we adjusted our records with the Darwin Core specifications (Wieczorek et al. 2012).