• LifeWatch ERIC Metadata Catalogue
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Metabarcoding Occurrence Intersector

This service intersects the map(s) (geographical spatial polygons) from GBIF occurrence(s) with the locations of a list of taxa detected from eDNA metabarcoding and which were not included in the NIS checklist to verify if such eDNA detection(s) is/are likely to be new NIS detected in that location from eDNA sequences.

It represents the Step 5 of the Metabarcoding Workflow within the Internal Joint Initiative.

Default

Identification

Date ( Publication )
2021-03-23
Date ( Creation )
2019-07-04
Status
Under development / Pre operational
Version
1.0
Keywords
Geographic information
Keywords
Spatial data
Keywords
Native taxa
Keywords
Unrecorded taxa
Keywords
eDNA detections
Keywords
Metabarcoding
Keywords
IJI
Access constraints
License
Use limitation
The final license will be available soon.
Principal investigator
  CIBIO-InBIO - Ana Filipa Filipe
Custodian
  LifeWatch ERIC ICT Core - Antonio José SÁENZ-ALBANÉS
Publisher
  LifeWatch ERIC Service Centre - Lucia Vaira
Principal investigator
  LifeWatch ERIC ICT Core - Juan Miguel GONZÁLEZ-ARANDA
 
Protocol
DOI
Operation name
sample_data_step_4_out.rdata
Function
Input file
Operation name
occurrences_metabc_out.csv
Function
Output file
Service Category
data processing
Service Language
eng
Service TRL
TRL 7 – System prototype demonstration in operational environment
 

Overviews

Spatial extent

Keywords


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