ARMS WoRMS Taxonomic Checker

This service takes the OTU tables from the previous step (running the omics pipeline) and check it using the WoRMS taxon match webservice.

It is part of the ARMS workflow of the Internal Joint Initiative available here: <a href=" https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/edf6017e-dc2f-4eec-8248-5a6c5de381b6" target="_blank"> https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/edf6017e-dc2f-4eec-8248-5a6c5de381b6</a>.

Default

Date ( Publication)
2021-03-29
Status
Completed
Principal investigator
  VLIZ - Katrina Exter

Custodian
  LifeWatch ERIC ICT Core - Antonio José SÁENZ-ALBANÉS

Publisher
  LifeWatch ERIC Service Centre - Lucia Vaira

Principal investigator
  LifeWatch ERIC ICT Core - ICT Core Group

Keywords

remote sensing
Keywords

metagenomics
Keywords

species information backbone
Keywords

taxonomy
Keywords

synonymy
Keywords

taxon match
Keywords

taxonomic classification
Keywords

ARMS
Keywords

IJI
Access constraints
License
Use limitation

The final license will be available soon.

Distribution Information

OnLine resource
Link to the service (

WWW:LINK-1.0-http--link

 )
OnLine resource
WoRMS taxon match webservice (LifeWatch.be) (

WWW:LINK-1.0-http--link

 )
Operation name

Unified_species.csv
Function

Input file
Operation name

Unified_species_worms.csv
Function

Output file
Related Services

Workflow Studio
Service Category

data validation
Service Category

data analysis
Service Category

data processing
Service Language
eng
Service TRL
TRL 7 – System prototype demonstration in operational environment
Service Helpdesk

https://helpdesk.lifewatch.eu/

Service Training

https://training.lifewatch.eu/resources/?resource=/course/view.php?id=38

Metadata

File identifier
e9cb479f-9a36-4504-8d59-dd28520cec70 XML
Metadata language
en
Hierarchy level
Service
Metadata Schema Version

1.0
 
 

Overviews

overview
metagenomics.jpg

Spatial extent

Keywords



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