Metadata Catalogue
ARMS WoRMS Taxonomic Checker
This step of the ARMS IJI workflow does the following:
- Input: the OTU tables from the previous step (running the omics pipeline), containing taxa (usually genus or species names) obtained from the databases used by the pipeline;
- Check: using the WoRMS taxon match webservice to check for the WoRMS match to those taxa;
- Output: the WoRMS match (yes or not) and, if matched, the scientific name and aphiaID.
It represents the Step 7 of the ARMS Workflow within the Internal Joint Initiative.
Default
- Date ( Publication)
- 2021-03-29
- Date ( Creation)
- 2019-07-04
- Status
- Under development / Pre operational
- Keywords
-
remote sensing
- Keywords
-
metagenomics
- Keywords
-
species information backbone
- Keywords
-
taxonomy
- Keywords
-
synonymy
- Keywords
-
taxon match
- Keywords
-
taxonomic classification
- Keywords
-
ARMS
- Keywords
-
IJI
- Access constraints
- License
- Use limitation
-
The final license will be available soon.
- OnLine resource
-
WoRMS taxon match webservice (LifeWatch.be)
(
WWW:LINK-1.0-http--link
)
- Operation name
-
Unified_species.csv
- Function
-
Input file
- Operation name
-
Unified_species_worms.csv
- Function
-
Output file
- Service Category
-
data validation
- Service Category
-
data analysis
- Service Category
-
data processing
- Service Language
- eng
- Service TRL
- TRL 7 – System prototype demonstration in operational environment
- Service Helpdesk
Metadata
- File identifier
- e9cb479f-9a36-4504-8d59-dd28520cec70 XML
- Metadata language
- en
- Hierarchy level
- Service
- Metadata Schema Version
-
1.0
