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ARMS WoRMS Taxonomic Checker

This service takes the OTU tables from the previous step (running the omics pipeline) and check it using the WoRMS taxon match webservice.

It is part of the ARMS workflow of the Internal Joint Initiative available here: <a href=" https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/edf6017e-dc2f-4eec-8248-5a6c5de381b6" target="_blank"> https://metadatacatalogue.lifewatch.eu/srv/eng/catalog.search#/metadata/edf6017e-dc2f-4eec-8248-5a6c5de381b6</a>.

Default

Date ( Publication)
2021-03-29
Status
Completed
Principal investigator
  VLIZ - Katrina Exter

Custodian
  LifeWatch ERIC ICT Core - Antonio José SÁENZ-ALBANÉS

Publisher
  LifeWatch ERIC Service Centre - Lucia Vaira

Principal investigator
  LifeWatch ERIC ICT Core - ICT Core Group

Keywords

remote sensing

Keywords

metagenomics

Keywords

species information backbone

Keywords

taxonomy

Keywords

synonymy

Keywords

taxon match

Keywords

taxonomic classification

Keywords

ARMS

Keywords

IJI

Access constraints
License
Use limitation

The final license will be available soon.

Other constraints

Open Access

Distribution Information

OnLine resource
Link to the service (

WWW:LINK-1.0-http--link

)
OnLine resource
WoRMS taxon match webservice (LifeWatch.be) (

WWW:LINK-1.0-http--link

)
Operation name

Unified_species.csv

Function

Input file

Operation name

Unified_species_worms.csv

Function

Output file

Related Services

Workflow Studio

Service Category

data validation

Service Category

data analysis

Service Category

data processing

Service Language
eng
Service TRL
TRL 7 – System prototype demonstration in operational environment
Service Helpdesk

https://helpdesk.lifewatch.eu/

Service Training

https://training.lifewatch.eu/resources/?resource=/course/view.php?id=38

Metadata

File identifier
e9cb479f-9a36-4504-8d59-dd28520cec70 XML
Metadata language
en
Hierarchy level
Service
Metadata Schema Version

1.0

 
 

Overviews

overview
metagenomics.jpg

Spatial extent

Keywords



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  • GeoNetwork APIs
  • Metadata Longevity Plan

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This service is powered by LifeWatch ERIC

The GeoNetwork open source software is released under the GPL v2 license and has been customised in plugins and functionalities by LifeWatch ERIC