LifeWatch ERIC Metadata Catalogue
ARMS WoRMS Taxonomic Checker
This step of the ARMS IJI workflow does the following:
- Input: the OTU tables from the previous step (running the omics pipeline), containing taxa (usually genus or species names) obtained from the databases used by the pipeline;
- Check: using the WoRMS taxon match webservice to check for the WoRMS match to those taxa;
- Output: the WoRMS match (yes or not) and, if matched, the scientific name and aphiaID.
It represents the Step 7 of the ARMS Workflow within the Internal Joint Initiative.
Default
Identification
- Date ( Publication )
- 2021-03-29
- Date ( Creation )
- 2019-07-04
- Status
- Under development / Pre operational
- Version
- 1.0
- Keywords
- species informaion backbone
- Keywords
- taxonomy
- Keywords
- synonymy
- Keywords
- taxon match
- Keywords
- taxonomic classification
- Keywords
- ARMS
- Keywords
- IJI
- Access constraints
- License
- Use limitation
- The final license will be available soon.
- OnLine resource
- WoRMS taxon match webservice (LifeWatch.be) ( WWW:LINK-1.0-http--link )
- Operation name
- Unified_species.csv
- Function
- Input file
- Operation name
- Unified_species_worms.csv
- Function
- Output file
- Service Category
- data validation
- Service Category
- data analysis
- Service Language
- eng
- Service TRL
- TRL 7 – System prototype demonstration in operational environment
