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Cell density and biomass of phytoplankton from Cabras Lagoon incubated in laboratory under warming in presence and in absence of mesozooplankton

This dataset inlcludes data of total cell density, total cell biomass and of taxonomical composition of phytoplankton from 49 samples collected troughout a laboratory experiment lasted 15 days and performed in the facilities of University of Sassari in July 2024. This phytoplankton community origins from Cabras Lagoon (Sardinia, Western Mediterranean). Among the total 49 samples, 24 samples were incubated in laboratory at environmental temperature (27°C), and among these, 6 samples included mesozooplankton as apical predators, 6 samples inlcuded only microzooplankton as apical predators. Other 24 samples were incubated in laboratory under warming (32°C), and among these, 6 samples included mesozooplankton as apical predators, 6 samples inlcuded only microzooplankton as apical predators. The lasting 1 sample is the sample collected in the field and represents the starting phytoplankton community incubated.

Default

IdentificationAbout this resource

Alternate Identifier

ea674f8c-c6a0-4cba-9cc2-a6cc386572c2

Publication Date
2025-07-10
Title

Cell density and biomass of phytoplankton from Cabras Lagoon incubated in laboratory under warming in presence and in absence of mesozooplankton

Abstract

This dataset inlcludes data of total cell density, total cell biomass and of taxonomical composition of phytoplankton from 49 samples collected troughout a laboratory experiment lasted 15 days and performed in the facilities of University of Sassari in July 2024. This phytoplankton community origins from Cabras Lagoon (Sardinia, Western Mediterranean). Among the total 49 samples, 24 samples were incubated in laboratory at environmental temperature (27°C), and among these, 6 samples included mesozooplankton as apical predators, 6 samples inlcuded only microzooplankton as apical predators. Other 24 samples were incubated in laboratory under warming (32°C), and among these, 6 samples included mesozooplankton as apical predators, 6 samples inlcuded only microzooplankton as apical predators. The lasting 1 sample is the sample collected in the field and represents the starting phytoplankton community incubated.

Dataset Language

English

 
Dataset Creator
  University of Sassari, Department of Architecture, Design and Urban planning - Silvia Pulina (Researcher)

Dataset Creator
  University of Sassari, Department of Architecture, Design and Urban planning - Cristina Pittalis (Collaborator)

Metadata Provider
  University of Sassari, Department of Architecture, Design and Urban planning - Silvia Pulina (Researcher)

Associated Party

Information Manager

  University of Salento - Martina Pulieri (Research assistant)

Dataset Contact
  University of Sassari, Department of Architecture, Design and Urban planning - Silvia Pulina (Researcher)

Keywords (Biodiversity Thesaurus)
  • climate warming

Keywords (Environmental Thesaurus)
  • phytoplankton

  • laboratory method

Keywords (eLTER Controlled Lists)
  • Lagoon

Keywords (Traits Thesaurus)
  • Density

  • Biomass

Geographic Coverage

Geographic Description

Bounding Box

West Bounding Coordinate
East Bounding Coordinate
North Bounding Coordinate
South Bounding Coordinate

Bounding Altitudes

Minimum
Maximum
Unit

Temporal Coverage

Range of Dates

Begin Date
End Date

resourceLicensesLicense Information

Intellectual Rights

Free for use, including sharing and adaptation, by all individuals provided that the owners are acknowledged in any use or publication.

Resource License

License Name

Creative Commons Attribution 4.0 International License

URL
https://creativecommons.org/licenses/by/4.0/
 

Distribution

Online

A brief description of the the content of online URL.

DOI

URL
https://doi.org/10.48372/fpmw-8e85

Online

A brief description of the the content of online URL.

Info and download page on LifeWatch Italy Data Portal

URL
https://data.lifewatchitaly.eu/handle/123456789/208422

Online

A brief description of the the content of online URL.

Associated publication

URL
https://doi.org/10.3897/oneeco.11.e183254

Online

A brief description of the the content of online URL.

Associated publication

URL
https://doi.org/10.1016/j.ecss.2026.109796
 
 

Project

• Project

Title

FUTURE - a warmer Future world: effects on plankton commUnities and paThogens in mediterranean vUlneRable Ecosystems

Personnel

Individual Name

Given Name

Silvia

Surname

Pulina

Organization Name

University of Sassari, Department of Architecture, Design and Urban planning

Position Name

Researcher

Email

spulina@uniss.it

User ID

0000-0002-4861-4170

Role

Point Of Contact

 
 

Methods

• Method

Method Step

Description

Two natural plankton communities were collected from Bidighinzu Lake and Cabras Lagoon and they were incubated separately in laboratory at an increased temperature treatment, in presence and in absence of mesozooplankton. The experiment was carried out for about three consecutive weeks in summer season. Water samples from Bidighinzu Lake and Cabras Lagoon were part sieved in situ with a 200 μm mesh to remove mesozooplankton, and thereafter transferred immediately to the laboratory for incubation in semi-transparent plastic buckets at two water temperatures: (i) the control, the present-day summer mean water temperature; (ii) at a +5 °C increased temperature compared to the control units. For each incubated plankton community, the two temperature conditions were applied in triplicate units filled with about 30 L of the mesh filtered water (i.e. 3 buckets under the control temperature and 3 buckets under the +5 °C treatment), and in triplicate units filled with about 30 L of the no mesh filtered water (i.e. 3 buckets under the control temperature and 3 buckets under the +5 °C treatment), resulting in 12 incubation units in total for each ecosystem.

Method Step

Description

Phytoplankton was analysed according to the Utermöhl technique. Density was determined from 2% acid Lugol’s solution fixed sub-samples using an inverted light microscope at 100x, 200x and 400x magnification. The counts were done in an adequate number of fields, counting at least 400 individuals. For species identification, fresh samples will be also observed, aiming to reach the highest certain taxonomic level. Density (cell L-1) and total carbon content (μg C L-1) were calculated.

 
 

Data Tables

• Data Table

Name

Phytoplankton_DensityBiomass_LaboratoryConditions.csv

Physical

Data Format

Externally Defined Format

Format Name

csv

Attribute List

Attribute

Name

catalogNumber

Label

Catalog Number

Definition

An identifier (preferably unique) for the record within the data set or collection.

Measurement Scale

nominal

nonNumericDomain

textDomain

Definition

Any Text

Annotation

http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#hasContext

http://rs.tdwg.org/dwc/terms/catalogNumber

Attribute

Name

timeMeasurement

Label

time measurement

Definition

Time measurement is a measurement value of the duration of some interval of time or a particular instant of time (against some frame of reference).

Measurement Scale

nominal

nonNumericDomain

enumeratedDomain

codeDefinition

0

-

-

codeDefinition

2

-

-

codeDefinition

6

-

-

codeDefinition

9

-

-

codeDefinition

14

-

-

Annotation

http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#hasContext

http://semanticscience.org/resource/SIO_000391

Attribute

Name

timeInstant

Label

time instant

Definition

A time instant is a temporal region which occurs instantaneously, e.g. having no duration.

Measurement Scale

nominal

nonNumericDomain

enumeratedDomain

codeDefinition

T0

-

-

codeDefinition

T1

-

-

codeDefinition

T2

-

-

codeDefinition

T3

-

-

codeDefinition

T4

-

-

Annotation

http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#hasContext

http://semanticscience.org/resource/SIO_000418

Attribute

Name

eventID

Label

Event ID

Definition

An identifier for the set of information associated with a dwc:Event (something that occurs at a place and time). May be a global unique identifier or an identifier specific to the data set.

Measurement Scale

nominal

nonNumericDomain

enumeratedDomain

codeDefinition

1

-

-

codeDefinition

2

-

-

codeDefinition

3

-

-

codeDefinition

4

-

-

codeDefinition

5

-

-

codeDefinition

6

-

-

codeDefinition

7

-

-

codeDefinition

8

-

-

codeDefinition

9

-

-

codeDefinition

10

-

-

codeDefinition

11

-

-

codeDefinition

12

-

-

Annotation

http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#hasContext

http://rs.tdwg.org/dwc/terms/eventID

Attribute

Name

treatment

Label

treatment

Definition

[EFO] A process in which the act is intended to modify or alter some other material entity

Measurement Scale

nominal

nonNumericDomain

enumeratedDomain

codeDefinition

Env

Environmental temperature

-

codeDefinition

Env M

Environmental temperature with mesoplankton

-

codeDefinition

HW

Heat waves

-

codeDefinition

HW M

Heat waves with mesoplankton

-

Annotation

http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#hasContext

http://vocabs.lter-europe.net/EnvThes/12

Attribute

Name

parentEventID

Label

Parent Event ID

Definition

An identifier for the broader dwc:Event that groups this and potentially other dwc:Events.

Measurement Scale

nominal

nonNumericDomain

enumeratedDomain

codeDefinition

A

-

-

codeDefinition

B

-

-

codeDefinition

C

-

-

Annotation

http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#hasContext

http://rs.tdwg.org/dwc/terms/parentEventID

Attribute

Name

verbatimIdentification

Label

Verbatim Identification

Definition

A string representing the taxonomic identification as it appeared in the original record.

Measurement Scale

nominal

nonNumericDomain

textDomain

Definition

Any Text

Annotation

http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#hasContext

http://rs.tdwg.org/dwc/terms/verbatimIdentification

Attribute

Name

kingdom

Label

Kingdom

Definition

The full scientific name of the kingdom in which the dwc:Taxon is classified.

Measurement Scale

nominal

nonNumericDomain

textDomain

Definition

Any Text

Annotation

http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#hasContext

http://rs.tdwg.org/dwc/terms/kingdom

Attribute

Name

phylum

Label

Phylum

Definition

The full scientific name of the phylum or division in which the dwc:Taxon is classified.

Measurement Scale

nominal

nonNumericDomain

textDomain

Definition

Any Text

Annotation

http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#hasContext

http://rs.tdwg.org/dwc/terms/phylum

Attribute

Name

class

Label

Class

Definition

The full scientific name of the class in which the dwc:Taxon is classified.

Measurement Scale

nominal

nonNumericDomain

textDomain

Definition

Any Text

Annotation

http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#hasContext

http://rs.tdwg.org/dwc/terms/class

Attribute

Name

order

Label

Order

Definition

The full scientific name of the order in which the dwc:Taxon is classified.

Measurement Scale

nominal

nonNumericDomain

textDomain

Definition

Any Text

Annotation

http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#hasContext

http://rs.tdwg.org/dwc/terms/order

Attribute

Name

family

Label

Family

Definition

The full scientific name of the family in which the dwc:Taxon is classified.

Measurement Scale

nominal

nonNumericDomain

textDomain

Definition

Any Text

Annotation

http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#hasContext

http://rs.tdwg.org/dwc/terms/family

Attribute

Name

genus

Label

Genus

Definition

The full scientific name of the genus in which the dwc:Taxon is classified.

Measurement Scale

nominal

nonNumericDomain

textDomain

Definition

Any Text

Annotation

http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#hasContext

http://rs.tdwg.org/dwc/terms/genus

Attribute

Name

acceptedNameUsage

Label

Accepted Name Usage

Definition

The full name, with authorship and date information if known, of the currently valid (zoological) or accepted (botanical) dwc:Taxon.

Measurement Scale

nominal

nonNumericDomain

textDomain

Definition

Any Text

Annotation

http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#hasContext

http://rs.tdwg.org/dwc/terms/acceptedNameUsage

Attribute

Name

scientificNameAuthorship

Label

Scientific Name Authorship

Definition

The authorship information for the dwc:scientificName formatted according to the conventions of the applicable dwc:nomenclaturalCode.

Measurement Scale

nominal

nonNumericDomain

textDomain

Definition

Any Text

Annotation

http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#hasContext

http://rs.tdwg.org/dwc/terms/scientificNameAuthorship

Attribute

Name

acceptedNameUsageID

Label

Accepted Name Usage ID

Definition

An identifier for the name usage (documented meaning of the name according to a source) of the currently valid (zoological) or accepted (botanical) taxon.

Measurement Scale

nominal

nonNumericDomain

textDomain

Definition

Any Text

Annotation

http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#hasCode

http://rs.tdwg.org/dwc/terms/acceptedNameUsageID

Attribute

Name

taxonRank

Label

Taxon Rank

Definition

The taxonomic rank of the most specific name in the dwc:scientificName.

Measurement Scale

nominal

nonNumericDomain

enumeratedDomain

codeDefinition

class

-

-

codeDefinition

order

-

-

codeDefinition

family

-

-

codeDefinition

genus

-

-

codeDefinition

species

-

-

Annotation

http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#hasContext

http://rs.tdwg.org/dwc/terms/taxonRank

Attribute

Name

density

Label

Density

Definition

The number of organisms,designated by taxonomic names (e.g. species, genus, family), per unit area or per unit volume.

Measurement Scale

Ratio

Unit

Custom Unit

cell L-1

Numeric domain

Number type

natural

Annotation

http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#containsMeasurementsOfType

https://kos.lifewatch.eu/thesauri/traits/c_ddc0028f

Attribute

Name

biomass

Label

Biomass

Definition

The amount of living organic matter per unit area or per unit volume. It can be expressed in terms of biovolume, weight or carbon content and can be measured at different organisational levels.

Measurement Scale

Ratio

Unit

Custom Unit

µg C L-1

Numeric domain

Number type

natural

Annotation

http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#containsMeasurementsOfType

https://kos.lifewatch.eu/thesauri/traits/c_331cd569

 
 






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