Fastq

This is one of the three input files required for running Step 1 (Metabarcoding Runner) of the Metabarcoding workflow. The fastq file contains DNA sequences generated from High Throughput Sequencing of eDNA samples. The other two input files for Step 1 are the "Reference_db" and the "Sample_metadata" containing respectively the reference genetic sequences for the taxonomic assignment and the eDNA samples information.

Default

Identification

Alternate Identifier
f84e2694-c90c-4c70-a727-0bfc1f7c049f
Publication Date
2021-03-23
Title
Fastq
Abstract
This is one of the three input files required for running Step 1 (Metabarcoding Runner) of the Metabarcoding workflow. The fastq file contains DNA sequences generated from High Throughput Sequencing of eDNA samples. The other two input files for Step 1 are the "Reference_db" and the "Sample_metadata" containing respectively the reference genetic sequences for the taxonomic assignment and the eDNA samples information.
 
Dataset Creator
  CIBIO-InBIO - Ana Filipa Filipe (Researcher )
Dataset Contact
  CIBIO-InBIO - Ana Filipa Filipe (Researcher )
Keywords (NCI Thesaurus )
  • Text-based format
  • Biological sequences
  • Nucleotide calls
  • Quality scores
  • Metabarcoding
  • IJI

Geographic Coverage

Geographic Description

Bounding Box

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South Bounding Coordinate

Temporal Coverage

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Taxonomic Coverage

No information provided.

License Information

Intellectual Rights

Resource License

License Name
The final license will be available soon.
URL
 

Distribution

Online

A brief description of the the content of online URL.
Dataset
URL
https://workdrive.zoho.eu/home/s8bdh44c0223522004d0f98a95d73bacbb8ad/ws/3gv93b21d0e9ad571432a9c70e64c388b7b7c/folders/3x97e6209671dacf5423daa4f57b24a5c3ceb
 
 

Data Tables

Data Tables

• Data Table

Name
Fastq

Physicaldocument

Data Format

Externally Defined Format

Format Name
FASTQ
 
 

Not available