Fastq

This is one of the three input files required for running Step 1 (Metabarcoding Runner) of the Metabarcoding workflow. The fastq file contains DNA sequences generated from High Throughput Sequencing of eDNA samples. The other two input files for Step 1 are the "Reference_db" and the "Sample_metadata" containing respectively the reference genetic sequences for the taxonomic assignment and the eDNA samples information.

Identification

Alternate Identifier: f84e2694-c90c-4c70-a727-0bfc1f7c049f

Publication Date: 2021-03-23

Title: Fastq

Abstract: This is one of the three input files required for running Step 1 (Metabarcoding Runner) of the Metabarcoding workflow. The fastq file contains DNA sequences generated from High Throughput Sequencing of eDNA samples. The other two input files for Step 1 are the "Reference_db" and the "Sample_metadata" containing respectively the reference genetic sequences for the taxonomic assignment and the eDNA samples information.

Dataset Creator: CIBIO-InBIO - Ana Filipa Filipe (Researcher)

Dataset Contact: CIBIO-InBIO - Ana Filipa Filipe (Researcher)

Keywords (NCI Thesaurus)

Text-based format
Biological sequences
Nucleotide calls
Quality scores
Metabarcoding
IJI

Geographic Coverage

Geographic Description

Bounding Box

West Bounding Coordinate

East Bounding Coordinate

North Bounding Coordinate

South Bounding Coordinate

Temporal Coverage

Range of Dates

Begin Date

End Date

Taxonomic Coverage

No information provided.

License Information

Intellectual Rights

Distribution

Online

A brief description of the the content of online URL.: Dataset

URL: https://workdrive.zoho.eu/home/s8bdh44c0223522004d0f98a95d73bacbb8ad/ws/3gv93b21d0e9ad571432a9c70e64c388b7b7c/folders/3x97e6209671dacf5423daa4f57b24a5c3ceb

• Data Table

Name: Fastq

Physical

Data Format

Externally Defined Format

Format Name: FASTQ