Metadata Catalogue
The InBIO Barcoding Initiative Database: Depressaria infernella Corley Buchner, a new Iberian species of the Depressaria douglasella group
The dataset contains two records of moth specimens (Lepidoptera, Depressariidae) collected in 2011 and 2015 in continental Portugal. The study of these specimens resulted in the description of a new Portuguese endemic species, Depressaria infernella Corley amp; Buchner, 2019 based on differences found in the male and female genitalia and DNA barcodes in Corley et al. (2019). Specimens were detected and captured using a mercury-vapor lamp to attract the insects. Captured specimens were identified to species level and preserved in 96% ethanol or in dry storage. From each specimen a tissue sample, one leg, was removed to be used for DNA extraction. The DNA barcoding of these specimens was conducted within the InBIO Barcoding Initiative (IBI), funded by EnvMetaGen and PORBIOTA projects. DNA barcode sequences were deposited in BOLD (Barcode of Life Data System) online database. Collected specimens and DNA extracts are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources).
Default
Identification
- Alternate Identifier
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f90de717-7b3f-483f-aca2-46c300fe36a8
- Publication Date
- 2021-01-05
- Title
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The InBIO Barcoding Initiative Database: Depressaria infernella Corley Buchner, a new Iberian species of the Depressaria douglasella group
- Abstract
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The dataset contains two records of moth specimens (Lepidoptera, Depressariidae) collected in 2011 and 2015 in continental Portugal. The study of these specimens resulted in the description of a new Portuguese endemic species, Depressaria infernella Corley amp; Buchner, 2019 based on differences found in the male and female genitalia and DNA barcodes in Corley et al. (2019). Specimens were detected and captured using a mercury-vapor lamp to attract the insects. Captured specimens were identified to species level and preserved in 96% ethanol or in dry storage. From each specimen a tissue sample, one leg, was removed to be used for DNA extraction. The DNA barcoding of these specimens was conducted within the InBIO Barcoding Initiative (IBI), funded by EnvMetaGen and PORBIOTA projects. DNA barcode sequences were deposited in BOLD (Barcode of Life Data System) online database. Collected specimens and DNA extracts are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources).
- purpose
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The InBIO Barcoding Initiative (IBI) aims to develop a reference collection of DNA barcoding sequences primarily covering Portuguese invertebrate taxa providing a tool in ecological studies.
- Dataset Language
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ENGLISH
- Dataset Creator
- Dataset Creator
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CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto - Sónia Ferreira (Post-Doc Researcher)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Vairão
,Porto
,4485-661
,PORTUGAL
- Dataset Creator
- Dataset Creator
-
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto - Pedro Sousa (Post-Doc Researcher)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Vairão
,Porto
,4485-661
,PORTUGAL
- Dataset Creator
-
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto - Pedro Beja (Coordinating Researcher)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Vairão
,Porto
,4485-661
,PORTUGAL
- Metadata Provider
- Metadata Provider
-
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto - Sónia Ferreira (Post-Doc Researcher)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Vairão
,Porto
,4485-661
,PORTUGAL
- Metadata Provider
- Metadata Provider
-
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto - Pedro Sousa (Post-Doc Researcher)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Vairão
,Porto
,4485-661
,PORTUGAL
- Metadata Provider
-
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto - Pedro Beja (Coordinating Researcher)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Vairão
,Porto
,4485-661
,PORTUGAL
- Dataset Contact
-
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto - Pedro Beja (Coordinating Researcher)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Vairão
,Porto
,4485-661
,PORTUGAL
- Dataset Contact
-
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto - Sónia Ferreira (Post-Doc Researcher)
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
,Vairão
,Porto
,4485-661
,PORTUGAL
- Keywords (n/a)
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Lepidoptera
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- Keywords (n/a)
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Species
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- Keywords (GBIF Dataset Type Vocabulary: http://rs.gbif.org/vocabulary/gbif/dataset_type.xml)
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Occurrence
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- Keywords (n/a)
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Cytochrome c oxidase I (COI)
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- Keywords (n/a)
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DNA barcode
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- Keywords (n/a)
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Continental Portugal
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- Keywords (GBIF Dataset Type Vocabulary: http://rs.gbif.org/vocabulary/gbif/dataset_type_2015-07-10.xml)
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Occurrence
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Geographic Coverage
- Geographic Description
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Continental Portugal.
Bounding Box
- West Bounding Coordinate
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-7.573
- East Bounding Coordinate
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-6.902
- North Bounding Coordinate
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41.766
- South Bounding Coordinate
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40.326
Temporal Coverage
Range of Dates
- Begin Date
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2011-08-05
- End Date
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2015-06-19
Taxonomic Coverage
- General Taxonomic Coverage
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This dataset is composed of data relating to two Lepidoptera specimens. Both specimens were determined to species level. The dataset is composed of two species, Depressaria infernella Corley Buchner, 2019 and Agonopterix scopariella (Heinemann, 1870). Both species belong to the family Depressariidae.
Taxonomic Classification
- Taxonomic Rank Name
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Kingdom
- Taxonomic Rank Value
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Animalia
Taxonomic Classification
- Taxonomic Rank Name
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Phylum
- Taxonomic Rank Value
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Arthropoda
Taxonomic Classification
- Taxonomic Rank Name
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Class
- Taxonomic Rank Value
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Insecta
Taxonomic Classification
- Taxonomic Rank Name
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Order
- Taxonomic Rank Value
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Lepidoptera
Taxonomic Classification
- Taxonomic Rank Name
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Family
- Taxonomic Rank Value
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Depressariidae
License Information
- Intellectual Rights
-
This work is licensed under a
Creative Commons Attribution (CC-BY) 4.0 License
.
Distribution
Additional Metadata
Metadata
GBIF Metadata Block
- Date Stamp
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2021-11-29T09:02:50Z
- Citation
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Corley M, Ferreira S, Buchner P, Sousa P, Beja P (2021). The InBIO Barcoding Initiative Database: Depressaria infernella Corley Buchner, a new Iberian species of the Depressaria douglasella group. Version 1.2. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Occurrence dataset https://doi.org/10.15468/gcg7ny accessed via GBIF.org on 2021-11-29.
- Bibliography
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Corley, M. F. V., Buchner, P. Ferreira, S. (2019). Depressaria infernella Corley Buchner, a new Iberian species of the Depressaria douglasella group (Lepidoptera: Depressariidae). SHILAP, Revista de Lepidopterología, 47(186): 293-300.
Hannemann, H. J., 1953. Natürliche Gruppierung der europäischen Arten der Gattung Depressaria s. l. (Lep. Oecoph.).– Mitteilungen aus dem Zoologischen Museum in Berlin, 29: 269-373.
Palm, E., 1989. Nordeuropas Prydvinger (Lepidoptera: Oecophoridae).– Danmarks Dyreliv, 4: 1-247.
- Collection
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CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal
4ec2b246-f5fa-4b90-9a8d-ddafc2a3f970
InBIO Barcoding Initiative
- Speciment Preservation Method
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ALCOHOL
- JGTI Curatorial Unit
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Voucher tube
1
2
- JGTI Curatorial Unit
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DNA extractions
1
2
Project
• Project
- Title
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The InBIO Barcoding Initiative Database: Depressaria infernella Corley Buchner, a new Iberian species of the Depressaria douglasella group
Personnel
Individual Name
- Given Name
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Pedro
- Surname
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Beja
- User ID
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0000-0001-8164-0760
- Role
-
AUTHOR
Personnel
Individual Name
- Given Name
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Sónia
- Surname
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Ferreira
- User ID
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0000-0002-6884-3966
- Role
-
AUTHOR
Personnel
Individual Name
- Given Name
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Martin
- Surname
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Corley
- User ID
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0000-0003-4240-8007
- Role
-
AUTHOR
Personnel
Individual Name
- Given Name
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Peter
- Surname
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Buchner
- Role
-
AUTHOR
Personnel
Individual Name
- Given Name
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Pedro
- Surname
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Sousa
- User ID
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0000-0002-5859-9656
- Role
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ORIGINATOR
- Abstract
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The InBIO Barcoding Initiative aims to develop a reference collection of DNA barcoding sequences covering Portuguese invertebrate taxa. Within the project, a special focus is afforded to insects, given their relevance to food webs, ecosystems functioning, high diversity and limited number of DNA barcoding sequences of interest.
- Funding
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InBIO Barcoding Initiative is funded by the European Union’s Horizon 2020 Research and Innovation programme under grant agreement No 668981 and by the project PORBIOTA — Portuguese E-Infrastructure for Information and Research on Biodiversity (POCI-01-0145-FEDER-022127), supported by Operational Thematic Program for Competitiveness and Internationalization (POCI), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (FEDER).
Study Area Description
- Descriptor
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The two specimens were collected in the districts of Bragança and Guarda, in Continental Portugal, in 2011 and 2015.
Design Description
- Description
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The specimens in this dataset were collected in Continental Portugal in two field work incursions carried out in 2011 and 2015. Specimens were detected using a mercury-vapor lamps as lures.
Methods
• Method
Method Step
- Description
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Specimens were captured in two localities of continental Portugal, in 2011 and 2015, using mercury-vapor lamps as lures.
Method Step
- Description
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Captured specimens were preserved in 96% ethanol or in dry storage.
Method Step
- Description
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The specimens were morphologically identified using a binocular stereoscopic microscope and resorting to available literature (Corley, Buchner Ferreira, 2019; Hannemann, 1953; Palm, 1989.)
Method Step
- Description
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A DNA barcode was sequenced from a tissue sample, one leg, that was removed. DNA was then extracted, and a 658 bp COI DNA barcode fragment was amplified and sequenced.
Method Step
- Description
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The obtained sequences were submitted to BOLD database and the specimen morphological identification was contrasted with the results of the BLAST of the newly generated DNA barcode in BOLD Identification Engine.
Method Step
- Description
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Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 ( http://openrefine.org/).
Sampling
- Study Extent
-
Specimens were collected in Continental Portugal in two field work incursions carried out in 2011 and 2015.
- Sampling Description
-
Specimens were captured in 2011 and 2015 in continental Portugal uisng mercury-vapor lamps as lures. Captured insects were preserved in 96% ethanol or in dry storage and stored at the InBIO Barcoding Initiative reference collection for downstream molecular analysis. Collected specimens were morphologically identified using a binocular stereoscopic microscope.
qualityControl
- Description
-
The DNA barcoded specimen morphological identification was contrasted with the results of the Blast of the newly generated DNA barcode in BOLD Identification Engine. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 ( http://openrefine.org/).