Imaging flow cytometry from SMHI in Tangesund 2016

An imaging flow cytometer, the Imaging FlowCytobot, was used to investigate phytoplankton abundance and diversity in a fjordal system on the Swedish Skagerrak coast. Samples of 5 mL were collected approximately every 25 minutes. An automated winch was used to move the IFCB to different depths. Chlorophyll fluorescence of individual organisms was used to trigger the camera in the instrument. Several thousand images were collected in each sample. Automated image analyses was used to analyse the images produced to identify and count cells of different plankton taxa.

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Identification

Publication Date
2021-03-11
Title
Imaging flow cytometry from SMHI in Tangesund 2016
Abstract
An imaging flow cytometer, the Imaging FlowCytobot, was used to investigate phytoplankton abundance and diversity in a fjordal system on the Swedish Skagerrak coast. Samples of 5 mL were collected approximately every 25 minutes. An automated winch was used to move the IFCB to different depths. Chlorophyll fluorescence of individual organisms was used to trigger the camera in the instrument. Several thousand images were collected in each sample. Automated image analyses was used to analyse the images produced to identify and count cells of different plankton taxa.
Dataset Language
en
 
Dataset Creator
  Flanders Marine Institute (VLIZ)
BE
http://www.vliz.be
Metadata Provider
  Flanders Marine Institute (VLIZ)
BE
http://www.vliz.be
Associated Party
pointOfContact
  Michael Brosnahan
Dataset Contact
  Bengt Karlson
Keywords (ASFA )
  • Flow cytometry

Geographic CoverageMRGID:2379

Geographic Description
ANE, Skagerrak

Temporal Coverage

Range of Dates

Begin Date

2016-08-09

End Date

2016-10-16

License Information

Intellectual Rights

This work is licensed under a

Creative Commons Attribution (CC-BY) 4.0 License

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