Metadata Catalogue
Imaging flow cytometry from SMHI in Tangesund 2016
An imaging flow cytometer, the Imaging FlowCytobot, was used to investigate phytoplankton abundance and diversity in a fjordal system on the Swedish Skagerrak coast. Samples of 5 mL were collected approximately every 25 minutes. An automated winch was used to move the IFCB to different depths. Chlorophyll fluorescence of individual organisms was used to trigger the camera in the instrument. Several thousand images were collected in each sample. Automated image analyses was used to analyse the images produced to identify and count cells of different plankton taxa.
Default
Identification
- Publication Date
- 2021-12-02
- Title
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Imaging flow cytometry from SMHI in Tangesund 2016
- Abstract
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An imaging flow cytometer, the Imaging FlowCytobot, was used to investigate phytoplankton abundance and diversity in a fjordal system on the Swedish Skagerrak coast. Samples of 5 mL were collected approximately every 25 minutes. An automated winch was used to move the IFCB to different depths. Chlorophyll fluorescence of individual organisms was used to trigger the camera in the instrument. Several thousand images were collected in each sample. Automated image analyses was used to analyse the images produced to identify and count cells of different plankton taxa.
- Dataset Language
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en
- Dataset Creator
- Dataset Creator
- Metadata Provider
- Associated Party
- Dataset Contact
- Keywords (ASFA)
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Flow cytometry
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Geographic Coverage
- Geographic Description
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ANE, Skagerrak
Geographic Coverage
- Geographic Description
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EurOBIS calculated BBOX > station Bounding Box
Bounding Box
- West Bounding Coordinate
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11.493
- East Bounding Coordinate
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11.493
- North Bounding Coordinate
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58.075
- South Bounding Coordinate
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58.075
Temporal Coverage
Range of Dates
- Begin Date
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2016-08-09
- End Date
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2016-10-16
License Information
- Intellectual Rights
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This work is licensed under a
Creative Commons Attribution (CC-BY) 4.0 License
.
Additional Metadata
- describes
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Extra metadata added by VLIZ to add parameter, platform info, as well as GBIF fields
Metadata
GBIF Metadata Block
- Date Stamp
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2021-12-02T14:52:40+01:00
- Hierarchy Level
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dataset
- Citation
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Swedish Meteorological and Hydrological Institute (2018). Imaging flow cytometry from SMHI in Tangesund 2016.
Physical
- Object Name
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Online dataset
- Character Encoding
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UTF-8
Data Format
Externally Defined Format
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HTML
Distribution
Physical
- Object Name
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Online dataset
- Character Encoding
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UTF-8
Data Format
Externally Defined Format
- Format Name
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HTML
Distribution
Physical
- Object Name
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Online dataset
- Character Encoding
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UTF-8
Data Format
Externally Defined Format
- Format Name
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HTML
Distribution
Physical
- Object Name
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Metadata
- Character Encoding
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UTF-8
Data Format
Externally Defined Format
- Format Name
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HTML