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Occurrence of Eukaryotes in the size fraction >680 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a Régent net and analysed on a ZooScan imaging platform

The Tara Oceans project sampled contrasting ecosystems of the world oceans during a three-year expedition (2009-2013), collecting environmental data and plankton, from viruses to metazoans, on board the 36-metre Tara Schooner. It surveyed 210 ecosystems in 20 biogeographic provinces, collecting over 35,000 samples of seawater and plankton. Samples were later analysed using modern sequencing and state-of-the-art imaging technologies.

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Default

Identification

Publication Date
2021-12-02
Title

Occurrence of Eukaryotes in the size fraction >680 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a Régent net and analysed on a ZooScan imaging platform

Abstract

The Tara Oceans project sampled contrasting ecosystems of the world oceans during a three-year expedition (2009-2013), collecting environmental data and plankton, from viruses to metazoans, on board the 36-metre Tara Schooner. It surveyed 210 ecosystems in 20 biogeographic provinces, collecting over 35,000 samples of seawater and plankton. Samples were later analysed using modern sequencing and state-of-the-art imaging technologies.

Dataset Language

en

 
Dataset Creator
  European Molecular Biology Laboratory; European Bioinformatics Institute - Stefanie Kandels-Lewis

Dataset Creator
  European Molecular Biology Laboratory; European Bioinformatics Institute - Erik Karsenti

Dataset Creator
  European Molecular Biology Laboratory; European Bioinformatics Institute - Stéphane Pesant

Dataset Creator
  Sorbonne Université - Manoela Costa Brandão

Dataset Creator
  Sorbonne Université - Louis Caray-Counil

Dataset Creator
  Sorbonne Université - Céline Dimier

Dataset Creator
  Sorbonne Université - Gabriel Gorsky

Dataset Creator
  Sorbonne Université - Jean-Olivier Irisson

Dataset Creator
  Sorbonne Université - Laetitia Jalabert

Dataset Creator
  Sorbonne Université - Fabien Lombard

Dataset Creator
  Sorbonne Université - Marc Picheral

Dataset Creator
  Sorbonne Université - Jean-Baptiste Romagnan

Dataset Creator
  Sorbonne Université - Sarah Searson

Dataset Creator
  Sorbonne Université - Lars Stemmann

Dataset Creator
  Sorbonne Université; Sorbonne Université/CNRS, Laboratoire d'Océanographie de Villefranche - Manoela Costa Brandão

Dataset Creator
  Sorbonne Université; Sorbonne Université/CNRS, Laboratoire d'Océanographie de Villefranche - Louis Caray-Counil

Dataset Creator
  Sorbonne Université; Sorbonne Université/CNRS, Laboratoire d'Océanographie de Villefranche - Céline Dimier

Dataset Creator
  Sorbonne Université; Sorbonne Université/CNRS, Laboratoire d'Océanographie de Villefranche - Gabriel Gorsky

Dataset Creator
  Sorbonne Université; Sorbonne Université/CNRS, Laboratoire d'Océanographie de Villefranche - Jean-Olivier Irisson

Dataset Creator
  Sorbonne Université; Sorbonne Université/CNRS, Laboratoire d'Océanographie de Villefranche - Laetitia Jalabert

Dataset Creator
  Sorbonne Université; Sorbonne Université/CNRS, Laboratoire d'Océanographie de Villefranche - Fabien Lombard

Dataset Creator
  Sorbonne Université; Sorbonne Université/CNRS, Laboratoire d'Océanographie de Villefranche - Marc Picheral

Dataset Creator
  Sorbonne Université; Sorbonne Université/CNRS, Laboratoire d'Océanographie de Villefranche - Jean-Baptiste Romagnan

Dataset Creator
  Sorbonne Université; Sorbonne Université/CNRS, Laboratoire d'Océanographie de Villefranche - Sarah Searson

Dataset Creator
  Sorbonne Université; Sorbonne Université/CNRS, Laboratoire d'Océanographie de Villefranche - Lars Stemmann

Dataset Creator
  Tara Oceans Consortium - Tara Oceans Consortium Coordinators

Metadata Provider
  Flanders Marine Institute (VLIZ)

BE

https://www.vliz.be
Dataset Contact
  Sorbonne Université; Sorbonne Université/CNRS, Laboratoire d'Océanographie de Villefranche - Fabien Lombard

Keywords (ASFA)
  • EcoTaxa

Geographic Coverage

Geographic Description

A, North Atlantic

Bounding Box

West Bounding Coordinate

-168.192

East Bounding Coordinate

174.992

North Bounding Coordinate

79.227

South Bounding Coordinate

-64.206

Geographic Coverage

Geographic Description

EurOBIS calculated BBOX > station Bounding Box

Bounding Box

West Bounding Coordinate

-168.192233

East Bounding Coordinate

174.991667

North Bounding Coordinate

79.226667

South Bounding Coordinate

-64.206217

Geographic Coverage

Geographic Description

ISW, Indian Ocean

Geographic Coverage

Geographic Description

ISW, Red Sea

Geographic Coverage

Geographic Description

MED

Geographic Coverage

Geographic Description

Pacific Ocean I.

Geographic Coverage

Geographic Description

PNE, Arctic

Geographic Coverage

Geographic Description

PS, Antarctic Ocean

Temporal Coverage

Range of Dates

Begin Date

2009-09-07

End Date

2013-10-27

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:10194

Taxonomic Classification

Taxonomic Rank Name

gigaclass

Taxonomic Rank Value

Actinopterygii

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:17446

Taxonomic Classification

Taxonomic Rank Name

class

Taxonomic Rank Value

Appendicularia

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:137687

Taxonomic Classification

Taxonomic Rank Name

genus

Taxonomic Rank Value

Atlanta

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:104077

Taxonomic Classification

Taxonomic Rank Name

family

Taxonomic Rank Value

Augaptilidae

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:106673

Taxonomic Classification

Taxonomic Rank Name

infraorder

Taxonomic Rank Value

Brachyura

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:104079

Taxonomic Classification

Taxonomic Rank Name

family

Taxonomic Rank Value

Calanidae

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:1100

Taxonomic Classification

Taxonomic Rank Name

order

Taxonomic Rank Value

Calanoida

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:104080

Taxonomic Classification

Taxonomic Rank Name

family

Taxonomic Rank Value

Candaciidae

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:23000

Taxonomic Classification

Taxonomic Rank Name

family

Taxonomic Rank Value

Cavoliniidae

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:2081

Taxonomic Classification

Taxonomic Rank Name

phylum

Taxonomic Rank Value

Chaetognatha

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:1082

Taxonomic Classification

Taxonomic Rank Name

subclass

Taxonomic Rank Value

Cirripedia

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:1267

Taxonomic Classification

Taxonomic Rank Name

phylum

Taxonomic Rank Value

Cnidaria

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:1080

Taxonomic Classification

Taxonomic Rank Name

subclass

Taxonomic Rank Value

Copepoda

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:128569

Taxonomic Classification

Taxonomic Rank Name

family

Taxonomic Rank Value

Corycaeidae

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:1066

Taxonomic Classification

Taxonomic Rank Name

subphylum

Taxonomic Rank Value

Crustacea

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:1130

Taxonomic Classification

Taxonomic Rank Name

order

Taxonomic Rank Value

Decapoda

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:135338

Taxonomic Classification

Taxonomic Rank Name

family

Taxonomic Rank Value

Diphyidae

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:137212

Taxonomic Classification

Taxonomic Rank Name

order

Taxonomic Rank Value

Doliolida

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:104085

Taxonomic Classification

Taxonomic Rank Name

family

Taxonomic Rank Value

Eucalanidae

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:104086

Taxonomic Classification

Taxonomic Rank Name

family

Taxonomic Rank Value

Euchaetidae

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:1086

Taxonomic Classification

Taxonomic Rank Name

subclass

Taxonomic Rank Value

Eumalacostraca

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:110673

Taxonomic Classification

Taxonomic Rank Name

genus

Taxonomic Rank Value

Euphausia

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:1410

Taxonomic Classification

Taxonomic Rank Name

phylum

Taxonomic Rank Value

Foraminifera

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:104087

Taxonomic Classification

Taxonomic Rank Name

family

Taxonomic Rank Value

Heterorhabdidae

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:135339

Taxonomic Classification

Taxonomic Rank Name

family

Taxonomic Rank Value

Hippopodiidae

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:19494

Taxonomic Classification

Taxonomic Rank Name

subclass

Taxonomic Rank Value

Hydroidolina

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:1337

Taxonomic Classification

Taxonomic Rank Name

class

Taxonomic Rank Value

Hydrozoa

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:1205

Taxonomic Classification

Taxonomic Rank Name

suborder

Taxonomic Rank Value

Hyperiidea

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:106802

Taxonomic Classification

Taxonomic Rank Name

family

Taxonomic Rank Value

Laomediidae

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:13704

Taxonomic Classification

Taxonomic Rank Name

family

Taxonomic Rank Value

Limacinidae

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:51

Taxonomic Classification

Taxonomic Rank Name

phylum

Taxonomic Rank Value

Mollusca

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:103356

Taxonomic Classification

Taxonomic Rank Name

family

Taxonomic Rank Value

Oikopleuridae

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:112203

Taxonomic Classification

Taxonomic Rank Name

genus

Taxonomic Rank Value

Orbulina

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:1078

Taxonomic Classification

Taxonomic Rank Name

class

Taxonomic Rank Value

Ostracoda

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:345868

Taxonomic Classification

Taxonomic Rank Name

subclass

Taxonomic Rank Value

Phaeodaria

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:135335

Taxonomic Classification

Taxonomic Rank Name

suborder

Taxonomic Rank Value

Physonectae

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:1103

Taxonomic Classification

Taxonomic Rank Name

suborder

Taxonomic Rank Value

Poecilostomatoida

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:137213

Taxonomic Classification

Taxonomic Rank Name

order

Taxonomic Rank Value

Pyrosomatida

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:16842

Taxonomic Classification

Taxonomic Rank Name

family

Taxonomic Rank Value

Rhopalonematidae

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:137214

Taxonomic Classification

Taxonomic Rank Name

order

Taxonomic Rank Value

Salpida

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:106684

Taxonomic Classification

Taxonomic Rank Name

superfamily

Taxonomic Rank Value

Sergestoidea

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:1371

Taxonomic Classification

Taxonomic Rank Name

order

Taxonomic Rank Value

Siphonophorae

Taxonomic Coverage

General Taxonomic Coverage

urn:lsid:marinespecies.org:taxname:13703

Taxonomic Classification

Taxonomic Rank Name

order

Taxonomic Rank Value

Thecosomata

License Information

Intellectual Rights

This work is licensed under a

Creative Commons Attribution (CC-BY) 4.0 License

.

 

Distribution

Online

URL
https://ecotaxa.obs-vlfr.fr/api/collections/by_short_title?q=tara-oceans-regent-zooscan
 

Additional Metadata

describes

Extra metadata added by VLIZ to add parameter, platform info, as well as GBIF fields

Metadata

GBIF Metadata Block

Date Stamp

2021-12-02T14:57:03+01:00

Hierarchy Level

dataset

Citation

Romagnan, J.B., Jalabert, L., Brandao, M., Caray-Counil, L., Dimier, C., Picheral, M., Searson, S., Kandels-Lewis, S., Tara Oceans Consortium Coordinators, Karsenti, E., Pesant, s., Irisson, J.O., Lombard, F., Stemmann, L., Gorsky, G.; (2020) Occurrence of Eukaryotes in the size fraction >680 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a Régent net and analysed on a ZooScan imaging platform. http://dx.doi.org/10.14284/522

Physical

Object Name

Online dataset

Character Encoding

UTF-8

Data Format

Externally Defined Format

Format Name

HTML

Distribution

Online

URL
https://www.emodnet-biology.eu/portal/index.php?dasid=6514

Physical

Object Name

Online dataset

Character Encoding

UTF-8

Data Format

Externally Defined Format

Format Name

HTML

Distribution

Online

URL
https://www.emodnet-biology.eu/toolbox/en/download/occurrence/dataset/6514

Physical

Object Name

IPT

Character Encoding

UTF-8

Data Format

Externally Defined Format

Format Name

HTML

Distribution

Online

URL
http://ipt.vliz.be/eurobis/resource?r=dasid_6514

Physical

Object Name

Online dataset

Character Encoding

UTF-8

Data Format

Externally Defined Format

Format Name

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Distribution

Online

URL
https://obis.org/dataset/1a653b53-5fe5-4d67-b62c-a69294553304

Physical

Object Name

Project home page

Character Encoding

UTF-8

Data Format

Externally Defined Format

Format Name

HTML

Distribution

Online

URL
http://oceans.taraexpeditions.org

Physical

Object Name

Metadata

Character Encoding

UTF-8

Data Format

Externally Defined Format

Format Name

HTML

Distribution

Online

URL
http://www.eurobis.org//imis?dasid=6514